RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ARRDC5A6NEK1 342 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 F5H5K5 113 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 H3BSA7 217 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ICMTO60725 284 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 DEAF1O75398 565 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 CIB2O75838 187 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 NCR1O76036 304 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 SPARCP09486 303 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ANXA8P13928 327 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF23P17027 643 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 PAICSP22234 425 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ACHEP22303 614 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 FMO3P31513 532 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 LIPAP38571 399 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 GPR6P46095 362 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLC18B1Q6NT16 456 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLC27A4Q6P1M0 643 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 CD300LDQ6UXZ3 194 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 CFAP77Q6ZQR2 320 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 IQCF1Q8N6M8 205 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 DCLRE1CQ96SD1 692 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 COQ7Q99807 217 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ATF6BQ99941 703 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 MMADHCQ9H3L0 296 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 MSL2Q9HCI7 577 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF275Q9NSD4 429 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 ATPIF1Q9UII2 106 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
CTDSPL2-209ENST00000560620 IGHV1-69-2A0A0G2JMI3 117 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 LOC100289279A0A1B0GTE1 492 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 FAM183AA6NL82 134 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 IGHV1-46P01743 117 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CLUP10909 449 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 SPI1P17947 270 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TUBG1P23258 451 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLC6A9P48067 706 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 MMP15P51511 669 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 ECH1Q13011 328 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 PSG7Q13046 419 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 RIN1Q13671 783 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CCNIQ14094 377 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TAF13Q15543 124 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TRIP10Q15642 601 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 HFEQ30201 348 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF362Q5T0B9 420 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 LYPD4Q6UWN0 246 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 USP51Q70EK9 711 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 APOBEC3DQ96AK3 386 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CMBLQ96DG6 245 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 PLEKHA8Q96JA3 519 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 RBM4Q9BWF3 364 aaKnown RBP11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TEX12Q9BXU0 123 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 EGLN1Q9GZT9 426 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 POFUT1Q9H488 388 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TUBG2Q9NRH3 451 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CMC2Q9NRP2 79 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 MRPL22Q9NWU5 206 aaKnown RBP11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 NKIRAS2Q9NYR9 191 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 TREM2Q9NZC2 230 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CGGBP1Q9UFW8 167 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 CYB5R1Q9UHQ9 305 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZDHHC8Q9ULC8 765 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 ABCA1O95477 2261 aa11.06□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 TGFAP01135 160 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 LCATP04180 440 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 OSMP13725 252 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 TNFSF4P23510 183 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 GRK5P34947 590 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 GGT2P36268 569 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 TPTEP56180 551 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 TMEM33P57088 247 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 HIST1H3AP68431 136 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 MRPS11P82912 194 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 GINS1Q14691 196 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 HLXQ14774 488 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 FAM209AQ5JX71 171 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 HIST2H3PS2Q5TEC6 136 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 CCDC121Q6ZUS5 278 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 HIST2H3AQ71DI3 136 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 DCXRQ7Z4W1 244 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR5AS1Q8N127 324 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF511Q8NB15 262 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 PAPD5Q8NDF8 572 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR2Z1Q8NG97 314 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNRF4Q8WWF5 429 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 CCL17Q92583 94 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 PTP4A1Q93096 173 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 YIPF5Q969M3 257 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 SPTSSAQ969W0 71 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLCO4A1Q96BD0 722 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 DIRC2Q96SL1 478 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms