RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TUBG1	P23258	451 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ERVS71-1	P61550	626 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MOG	Q16653	247 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DNM1P46	Q6ZS02	220 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ZNF511	Q8NB15	262 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	OR6K6	Q8NGW6	343 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ABHD4	Q8TB40	342 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SORCS2	Q96PQ0	1159 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DCLRE1C	Q96SD1	692 aa	Known RBP	11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PITX2	Q99697	317 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	COQ7	Q99807	217 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	HCAR1	Q9BXC0	346 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MED20	Q9H944	212 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TUBG2	Q9NRH3	451 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SLCO1C1	Q9NYB5	712 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TLN2	Q9Y4G6	2542 aa		11.73	□□□□□ -0.53
CHRNB4-204	ENST00000559849	GCH1	P30793	250 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DSCR9	P59020	149 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PPP1CB	P62140	327 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ECH1	Q13011	328 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SNAPC1	Q16533	368 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TEX30	Q5JUR7	227 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	LINC01590	Q5TEZ4	76 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SLC7A6	Q92536	515 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MARS2	Q96GW9	593 aa	Known RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	C18orf12	Q96KH6	178 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	COG8	Q96MW5	612 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PKP2	Q99959	881 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	WDR76	Q9H967	626 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DLL4	Q9NR61	685 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MYEF2	Q9P2K5	600 aa	Known RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	COMMD3-BMI1	R4GMX3	469 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CSPG4	Q6UVK1	2322 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849		A0A1W2PPW3	197 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DPPA5	A6NC42	116 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TRIM64	A6NGJ6	449 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TRIM64B	A6NI03	449 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ZNF593	O00488	134 aa	Predicted RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MITF	O75030	526 aa	Predicted RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	GLCE	O94923	617 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CLPTM1	O96005	669 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	IGHV3-13	P01766	116 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	RGS6	P49758	472 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ENTPD1	P49961	510 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TNK1	Q13470	666 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PCK2	Q16822	640 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PLBD1	Q6P4A8	553 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TMEM154	Q6P9G4	183 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CLEC2A	Q6UVW9	174 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	LYPD4	Q6UWN0	246 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CFAP77	Q6ZQR2	320 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	RFPL4B	Q6ZWI9	263 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CPO	Q8IVL8	374 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SLC25A40	Q8TBP6	338 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	KLF14	Q8TD94	323 aa	Predicted RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	NEU4	Q8WWR8	484 aa	Predicted RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	RBM4B	Q9BQ04	359 aa	Known RBP	11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	RHNO1	Q9BSD3	238 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PRRG3	Q9BZD7	231 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	OR2J1	Q9GZK6	312 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	OR51V1	Q9H2C8	321 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TVP23B	Q9NYZ1	205 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TAAR3P	Q9P1P4	343 aa		11.72	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SAC3D1	A6NKF1	404 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849		H3BSA7	217 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849		J3QW42	95 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PRODH	O43272	600 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	DBH	P09172	617 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	IGFBP5	P24593	272 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ALDH3B1	P43353	468 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	PPP2R2B	Q00005	443 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TRIP10	Q15642	601 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	NKPD1	Q17RQ9	610 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	SPATA46	Q5T0L3	261 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MBNL2	Q5VZF2	373 aa	Known RBP	11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	MAP6	Q96JE9	813 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	CIB1	Q99828	191 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	ATF6B	Q99941	703 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	FAM192A	Q9GZU8	254 aa		11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.71	□□□□□ -0.53
CHRNB4-204	ENST00000559849		H7C1Q1	480 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CASQ2	O14958	399 aa	Predicted RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LY6H	O94772	140 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RPS27	P42677	84 aa	Known RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LPCAT4	Q643R3	524 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DCXR	Q7Z4W1	244 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF525	Q8N782	197 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OR5L1	Q8NGL2	311 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SNX33	Q8WV41	574 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PNRC2	Q9NPJ4	139 aa	Known RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	HINT3	Q9NQE9	182 aa	Known RBP	11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	STARD10	Q9Y365	291 aa		11.71	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZAR1L	A6NP61	321 aa		11.7	□□□□□ -0.54

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