RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 IGHV1-46P01743 117 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TFP02787 698 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 SPARCP09486 303 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TACSTD2P09758 323 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 HNF1AP20823 631 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TNFSF4P23510 183 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 POU1F1P28069 291 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 IL2RGP31785 369 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 LIPAP38571 399 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 RPS27P42677 84 aaKnown RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 RGS6P49758 472 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 MMP15P51511 669 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TMEM33P57088 247 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CBX1P83916 185 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TNFAIP6P98066 277 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 MVKQ03426 396 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 COX10Q12887 443 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 PSG7Q13046 419 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CRMP1Q14194 572 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 HFEQ30201 348 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 AVPI1Q5T686 147 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 SLC18B1Q6NT16 456 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CFAP77Q6ZQR2 320 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 ZNF771Q7L3S4 317 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 ZBTB46Q86UZ6 589 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 PRIMA1Q86XR5 153 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 HIPK1Q86Z02 1210 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 OR5AS1Q8N127 324 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 SLC37A3Q8NCC5 494 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 OR2Z1Q8NG97 314 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 OR5L1Q8NGL2 311 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 OR6K6Q8NGW6 343 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 OR4Q3Q8NH05 313 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CLDND2Q8NHS1 167 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CCL17Q92583 94 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 APOBEC3DQ96AK3 386 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 SLC7A6OSQ96CW6 309 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 CMBLQ96DG6 245 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 ELMOD3Q96FG2 381 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TIMD4Q96H15 378 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 DCLRE1CQ96SD1 692 aaKnown RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 FEVQ99581 238 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 COQ7Q99807 217 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 ATF6BQ99941 703 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 NIPSNAP1Q9BPW8 284 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 SOX7Q9BT81 388 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 DGCR6LQ9BY27 220 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 YY1AP1Q9H869 796 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 ZNF556Q9HAH1 456 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 LPAR2Q9HBW0 351 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 NKIRAS2Q9NYR9 191 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 PDP1Q9P0J1 537 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 KIF17Q9P2E2 1029 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 ATPIF1Q9UII2 106 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 KLHL21Q9UJP4 597 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 PURGQ9UJV8 347 aaKnown RBP6.98□□□□□ -1.29
SNX1-207ENST00000559401 CDC42EP3Q9UKI2 254 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 BAIAP2Q9UQB8 552 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 STARD10Q9Y365 291 aa6.98□□□□□ -1.29
SNX1-207ENST00000559401 TANC2Q9HCD6 1990 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 ABCA2Q9BZC7 2435 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 KIAA1324LA8MWY0 1029 aaPredicted RBP6.97□□□□□ -1.29
SNX1-207ENST00000559401 F5H5K5 113 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 FKBP6O75344 327 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 RP2O75695 350 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 IFNA2P01563 188 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 GYPBP06028 91 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 ZNF3P17036 446 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 HOXB6P17509 224 aaKnown RBP6.97□□□□□ -1.29
SNX1-207ENST00000559401 TUBG1P23258 451 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 IGFBP5P24593 272 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 FMO3P31513 532 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 CRYBB2P43320 205 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 SLC6A9P48067 706 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 RASSF2P50749 326 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 MRPS11P82912 194 aaKnown RBP6.97□□□□□ -1.29
SNX1-207ENST00000559401 ECH1Q13011 328 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 GK3PQ14409 553 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 TAF13Q15543 124 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 TMEM255AQ5JRV8 349 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 FAM209AQ5JX71 171 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 MALRD1Q5VYJ5 2156 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 LNX2Q8N448 690 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 IQCF1Q8N6M8 205 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 LINC01356Q8N9X3 169 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 BHLHE23Q8NDY6 225 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 HPS1Q92902 700 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 RAB1CQ92928 201 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 DIRC2Q96SL1 478 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 WDR76Q9H967 626 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 TUBG2Q9NRH3 451 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 MRPL22Q9NWU5 206 aaKnown RBP6.97□□□□□ -1.29
SNX1-207ENST00000559401 LPAR3Q9UBY5 353 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 KCNG2Q9UJ96 466 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 ZDHHC8Q9ULC8 765 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 POMPQ9Y244 141 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 CACNG2Q9Y698 323 aa6.97□□□□□ -1.29
SNX1-207ENST00000559401 COMMD3-BMI1R4GMX3 469 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms