RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 KIAA1324LA8MWY0 1029 aaPredicted RBP9.31□□□□□ -0.92
SPG11-216ENST00000559347 LMX1BO60663 402 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 TUBG1P23258 451 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CRYBB2P43320 205 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 RGS6P49758 472 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 ERFP50548 548 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 TEKQ02763 1124 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 PSG7Q13046 419 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CCNIQ14094 377 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 TSTQ16762 297 aaKnown RBP9.31□□□□□ -0.92
SPG11-216ENST00000559347 CHRFAM7AQ494W8 412 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 SLC36A3Q495N2 470 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 ZMAT1Q5H9K5 638 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 ZNF362Q5T0B9 420 aaPredicted RBP9.31□□□□□ -0.92
SPG11-216ENST00000559347 SLC18B1Q6NT16 456 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CORO6Q6QEF8 472 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 LINC00346Q8IVM7 164 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CYB561A3Q8NBI2 242 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 SLC37A3Q8NCC5 494 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 OR2T33Q8NG76 320 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 OR4Q3Q8NH05 313 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 C1orf159Q96HA4 380 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 DCLRE1CQ96SD1 692 aaKnown RBP9.31□□□□□ -0.92
SPG11-216ENST00000559347 DDOQ99489 341 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 RBM4Q9BWF3 364 aaKnown RBP9.31□□□□□ -0.92
SPG11-216ENST00000559347 CHID1Q9BWS9 393 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 TSSK6Q9BXA6 273 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 TUBG2Q9NRH3 451 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CYSLTR2Q9NS75 346 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 ARMC1Q9NVT9 282 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 KCNS2Q9ULS6 477 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 BAIAP2Q9UQB8 552 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 GRIP1Q9Y3R0 1128 aa9.31□□□□□ -0.92
SPG11-216ENST00000559347 IGHV1-69-2A0A0G2JMI3 117 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 TCRBV3S1A0A5B6 114 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 WNT9BO14905 357 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 TPD52L2O43399 206 aaKnown RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 PPIHO43447 177 aaKnown RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 SPRY3O43610 288 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 TIMM8AO60220 97 aaPredicted RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 CDC14BO60729 498 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 DNAJC8O75937 253 aaPredicted RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 HLA-DQA2P01906 255 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 PSKH1P11801 424 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 HOXB6P17509 224 aaKnown RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 KITLGP21583 273 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 PYCR1P32322 319 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 GGT2P36268 569 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 LIPAP38571 399 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CDH15P55291 814 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 TMEM33P57088 247 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CRMP1Q14194 572 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CD300LDQ6UXZ3 194 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 USP51Q70EK9 711 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 TMEM179BQ7Z7N9 219 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 SPATA24Q86W54 205 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 OR9Q1Q8NGQ5 310 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 OR2T4Q8NH00 348 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 ZNRF4Q8WWF5 429 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 ELMOD3Q96FG2 381 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 COG8Q96MW5 612 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 FEVQ99581 238 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 ATF6BQ99941 703 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 NMNAT2Q9BZQ4 307 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 MSL2Q9HCI7 577 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 PNRC2Q9NPJ4 139 aaKnown RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 DECR2Q9NUI1 292 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 LPAR3Q9UBY5 353 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CYB5R1Q9UHQ9 305 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 KCNG2Q9UJ96 466 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 KLHL21Q9UJP4 597 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 PURGQ9UJV8 347 aaKnown RBP9.3□□□□□ -0.92
SPG11-216ENST00000559347 ZDHHC8Q9ULC8 765 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 POMPQ9Y244 141 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 STARD10Q9Y365 291 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CACNG2Q9Y698 323 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 COMMD3-BMI1R4GMX3 469 aa9.3□□□□□ -0.92
SPG11-216ENST00000559347 CLDN25C9JDP6 229 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 TGFAP01135 160 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 CD55P08174 381 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 RPS27P42677 84 aaKnown RBP9.29□□□□□ -0.92
SPG11-216ENST00000559347 BNIP1Q12981 228 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 RSPO1Q2MKA7 263 aaPredicted RBP9.29□□□□□ -0.92
SPG11-216ENST00000559347 SPRNQ5BIV9 151 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 Q6ZR03 302 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 IL17RELQ6ZVW7 336 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 OR10S1Q8NGN2 331 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 TEX47Q8TBZ9 253 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 GIPC3Q8TF64 312 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 APOBEC3DQ96AK3 386 aaPredicted RBP9.29□□□□□ -0.92
SPG11-216ENST00000559347 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms