RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TCRBV3S1A0A5B6 114 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 A8MV72 311 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 CLDN25C9JDP6 229 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PRR23D1E9PI22 279 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 G3V2T6 193 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 DCTN6O00399 190 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 EBAG9O00559 213 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SURF4O15260 269 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PPIHO43447 177 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 SPRY3O43610 288 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CLPTM1O96005 669 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 NGFP01138 241 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 IFNA2P01563 188 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 APOC1P02654 83 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 TFP02787 698 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 HPXP02790 462 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SPARCP09486 303 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PRR23D2P0DMB1 279 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 GAAP10253 952 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 OSMP13725 252 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ANPEPP15144 967 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 RAC2P15153 192 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SELEP16581 610 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ZNF23P17027 643 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 TNFRSF1AP19438 455 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PCMT1P22061 227 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 GIFP27352 417 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 HSD11B1P28845 292 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 WNT5AP41221 380 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 GPR6P46095 362 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC6A9P48067 706 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 GZMKP49863 264 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ERFP50548 548 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 MMP15P51511 669 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CHN2P52757 468 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC25A1P53007 311 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 RAD23AP54725 363 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 TPTEP56180 551 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC3A1Q07837 685 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CRMP1Q14194 572 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 MAD2L1BPQ15013 274 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 TAF13Q15543 124 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 MEP1BQ16820 701 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC18B1Q6NT16 456 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SHQ1Q6PI26 577 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 CORO6Q6QEF8 472 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 LIAT1Q6ZQX7 453 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 RFPL4BQ6ZWI9 263 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 HIPK1Q86Z02 1210 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CYB561A3Q8NBI2 242 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC37A3Q8NCC5 494 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PAPD5Q8NDF8 572 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC26A10Q8NG04 563 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SLC25A40Q8TBP6 338 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CCL17Q92583 94 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 HPS1Q92902 700 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SPTSSAQ969W0 71 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 HAVCR1Q96D42 359 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ELMOD3Q96FG2 381 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ZNF582Q96NG8 517 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 COPS4Q9BT78 406 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 RBM4Q9BWF3 364 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 HCAR1Q9BXC0 346 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 CADM1Q9BY67 442 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 PLA2G12AQ9BZM1 189 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 SP140LQ9H930 580 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 YAE1D1Q9NRH1 226 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 PAPOLBQ9NRJ5 636 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 CMC2Q9NRP2 79 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 ARMC1Q9NVT9 282 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 MYEF2Q9P2K5 600 aaKnown RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 CDC42EP3Q9UKI2 254 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 KCNS2Q9ULS6 477 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 AP4S1Q9Y587 144 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 TLN2Q9Y4G6 2542 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 LOC100289279A0A1B0GTE1 492 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TVP23AA6NH52 213 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 VWC2LB2RUY7 222 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 B4DSR2 109 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ZNF878C9JN71 531 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 INAFM1C9JVW0 142 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 M0R135 149 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ZNF593O00488 134 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 PRODHO43272 600 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CDC14BO60729 498 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TIPRLO75663 272 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GLCEO94923 617 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GPANK1O95872 356 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TGFAP01135 160 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 IGHV1-46P01743 117 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 LCATP04180 440 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SCG5P05408 212 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GYPBP06028 91 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ADH4P08319 380 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 IGFBP1P08833 259 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 DBHP09172 617 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TACSTD2P09758 323 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 IGHV4-31P0DP07 118 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SPI1P17947 270 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 HNF1AP20823 631 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms