RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 CLEC9AQ6UXN8 241 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 SLC16A12Q6ZSM3 486 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 LINGO2Q7L985 606 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 ZER1Q7Z7L7 766 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 CPEB3Q8NE35 698 aaKnown RBP7.52□□□□□ -1.21
USP3-208ENST00000558285 OR13C2Q8NGS9 318 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 MOSPD2Q8NHP6 518 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 FANK1Q8TC84 345 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 SLC7A13Q8TCU3 470 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 GNPDA2Q8TDQ7 276 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 FAM168AQ92567 244 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
USP3-208ENST00000558285 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.21
USP3-208ENST00000558285 APOL4Q9BPW4 351 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 TMEM246Q9BRR3 403 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 PIMREGQ9BSJ6 248 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 FUNDC2Q9BWH2 189 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 SEMA6AQ9H2E6 1030 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 ELOVL3Q9HB03 270 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 POLR1DQ9Y2S0 133 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 SNX5Q9Y5X3 404 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 V9GYQ6 96 aa7.52□□□□□ -1.21
USP3-208ENST00000558285 AKAP6Q13023 2319 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 PNMA8CA0A1B0GUJ8 204 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 H7C1Q1 480 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 J3KTA2 159 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 M0R233 179 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 TNFRSF11BO00300 401 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 SSX4O60224 188 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 PIP5K1CO60331 668 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 KHDRBS3O75525 346 aaKnown RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 SNAP29O95721 258 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 CST2P09228 141 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 GCH1P30793 250 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 LIPAP38571 399 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 ETV1P50549 477 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 S100A12P80511 92 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 TEKQ02763 1124 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 ATAD3CQ5T2N8 411 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 TTC23Q5W5X9 447 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 RGS7BPQ6MZT1 257 aaPredicted RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 LRFN4Q6PJG9 635 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 SKA3Q8IX90 412 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 PAPD5Q8NDF8 572 aaKnown RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 BPIFB6Q8NFQ5 453 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 OR10H5Q8NGA6 315 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 OR10Z1Q8NGY1 313 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 OR52J3Q8NH60 311 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 CYGBQ8WWM9 190 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 IGFBPL1Q8WX77 278 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 NSMAFQ92636 917 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 NEUROG1Q92886 237 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 C7orf34Q96L11 122 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 GPX7Q96SL4 187 aaPredicted RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 NOX3Q9HBY0 568 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 RPRD1BQ9NQG5 326 aaKnown RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 CYSLTR2Q9NS75 346 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 MAN2C1Q9NTJ4 1040 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 B3GNT2Q9NY97 397 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 CGGBP1Q9UFW8 167 aaPredicted RBP7.51□□□□□ -1.21
USP3-208ENST00000558285 BAIAP2Q9UQB8 552 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 ADGRG4Q8IZF6 3080 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 DSCAMO60469 2012 aa7.51□□□□□ -1.21
USP3-208ENST00000558285 FREM1Q5H8C1 2179 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 DHRS12A0PJE2 317 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 PRSS37A4D1T9 235 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 FAM181BA6NEQ2 426 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 FFAR1O14842 300 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 SYNGR3O43761 229 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 CCNB2O95067 398 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 PRSS23O95084 383 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 IFNGP01579 166 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 GNAO1P09471 354 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 RAP2AP10114 183 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 ZNF14P17017 642 aaPredicted RBP7.5□□□□□ -1.21
USP3-208ENST00000558285 MAKP20794 623 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 CRHBPP24387 322 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 EEF1B2P24534 225 aaKnown RBP7.5□□□□□ -1.21
USP3-208ENST00000558285 CENPAP49450 140 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 BLVRAP53004 296 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 ERVK-25P63136 954 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 MVKQ03426 396 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 GLO1Q04760 184 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 SPOCK1Q08629 439 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 AQP6Q13520 282 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 NKPD1Q17RQ9 610 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 PCGF3Q3KNV8 242 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 PHYHD1Q5SRE7 291 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 UBE2UQ5VVX9 321 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 NHLRC1Q6VVB1 395 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 THAP5Q7Z6K1 395 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 TSPYL5Q86VY4 417 aaPredicted RBP7.5□□□□□ -1.21
USP3-208ENST00000558285 GLB1L2Q8IW92 636 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 LRRC18Q8N456 261 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 POC5Q8NA72 575 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 NPEPL1Q8NDH3 523 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
USP3-208ENST00000558285 IFT27Q9BW83 186 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms