RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 CKLFQ9UBR5 152 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
SHMT2-233ENST00000557529 V9GY05 133 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 CACNA1CQ13936 2221 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 OR14I1A6ND48 311 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 K7ENP7 123 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CRYABP02511 175 aaKnown RBP10.97□□□□□ -0.65
SHMT2-233ENST00000557529 TTRP02766 147 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 B4GALT1P15291 398 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF12P17014 697 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 FSTP19883 344 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 PTBP1P26599 531 aaKnown RBP eCLIP10.97□□□□□ -0.65
SHMT2-233ENST00000557529 THBS2P35442 1172 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 MAGEB1P43366 347 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CX3CR1P49238 355 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 PRKXP51817 358 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF181Q2M3W8 571 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 SLC25A35Q3KQZ1 300 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CCDC92Q53HC0 331 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-233ENST00000557529 INO80CQ6PI98 192 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-233ENST00000557529 P4HA3Q7Z4N8 544 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 ADGRE4PQ86SQ3 457 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 LUZP2Q86TE4 346 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 OR13C3Q8NGS6 347 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 ASB5Q8WWX0 329 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 SPTSSAQ969W0 71 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 PPP1R14AQ96A00 147 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 FBXO17Q96EF6 278 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 GMPPAQ96IJ6 420 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-233ENST00000557529 TAAR6Q96RI8 345 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CCDC32Q9BV29 185 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 SLC25A18Q9H1K4 315 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 BRD7Q9NPI1 651 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 SLC7A10Q9NS82 523 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 PLEK2Q9NYT0 353 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CLCF1Q9UBD9 225 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 UPB1Q9UBR1 384 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 CLEC4AQ9UMR7 237 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 FOXJ3Q9UPW0 622 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 TIMM10BQ9Y5J6 103 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 V9GYH0 126 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF407Q9C0G0 2248 aa10.97□□□□□ -0.65
SHMT2-233ENST00000557529 A0A1B0GVI7 797 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ISPDA4D126 451 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 FABP12A6NFH5 140 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ANXA2P2A6NMY6 339 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 IFITM5A6NNB3 132 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 TTLL8A6PVC2 850 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 AIPO00170 330 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 P2RY10O00398 339 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 SGCEO43556 437 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 HPGDSO60760 199 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 UPK1BO75841 260 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 TGM6O95932 706 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ACSM4P0C7M7 580 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ATF1P18846 271 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 AGTR1P30556 359 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 OTX1P32242 354 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 EVX1P49640 407 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 UCNP55089 124 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF121P58317 390 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 SF3B4Q15427 424 aaKnown RBP eCLIP10.96□□□□□ -0.656e-9■■■■■ 37.1
SHMT2-233ENST00000557529 RGS21Q2M5E4 152 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 XKRXQ6PP77 449 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 FAM131AQ6UXB0 335 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF813Q6ZN06 617 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF627Q7L945 461 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 SLC16A14Q7RTX9 510 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 LRRTM1Q86UE6 522 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 LRRC28Q86X40 367 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF433Q8N7K0 673 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 RBMXL3Q8N7X1 1067 aaKnown RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 TRMT10AQ8TBZ6 339 aaKnown RBP10.96□□□□□ -0.65
SHMT2-233ENST00000557529 ORAI1Q96D31 301 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 CMTM3Q96MX0 182 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 SH3GL3Q99963 347 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 SLC5A6Q9Y289 635 aa10.96□□□□□ -0.65
SHMT2-233ENST00000557529 DNAJC13O75165 2243 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 TRAV8-7A0A075B6U6 113 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 MEGF11A6BM72 1044 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 AHRRA9YTQ3 701 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 FAM25AB3EWG3 89 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 FAM25CB3EWG5 89 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 FAM25GB3EWG6 89 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SYT7O43581 403 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SS18L1O75177 396 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-233ENST00000557529 PDGFAP04085 211 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SLC2A2P11168 524 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-233ENST00000557529 TALDO1P37837 337 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 ARF1P84077 181 aaKnown RBP10.95□□□□□ -0.66
SHMT2-233ENST00000557529 GALK2Q01415 458 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 CNIH2Q6PI25 160 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 NUFIP2Q7Z417 695 aaKnown RBP10.95□□□□□ -0.66
SHMT2-233ENST00000557529 UBE2J2Q8N2K1 259 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 SAMD12Q8N8I0 201 aa10.95□□□□□ -0.66
SHMT2-233ENST00000557529 CCDC54Q8NEL0 328 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms