RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 IFFO1Q0D2I5 559 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-221ENST00000557293 SLC30A8Q8IWU4 369 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 Q8TCH9 128 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 RBP7Q96R05 134 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 DPAGT1Q9H3H5 408 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 STX18Q9P2W9 335 aaKnown RBP10.33□□□□□ -0.76
PSEN1-221ENST00000557293 TMCC3Q9ULS5 477 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 FOXJ3Q9UPW0 622 aa10.33□□□□□ -0.76
PSEN1-221ENST00000557293 TENM3Q9P273 2699 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 C12orf71A8MTZ7 269 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 IGF2P01344 180 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 HLA-DPB1P04440 258 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 PPIBP23284 216 aaKnown RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 TGFBR2P37173 567 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 HTR5AP47898 357 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 MRPL19P49406 292 aaKnown RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 NPY4RP50391 375 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 EFNB2P52799 333 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 CRYBA2P53672 197 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 RAD23AP54725 363 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 RPL27P61353 136 aaKnown RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 DBPQ10586 325 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 FHL1Q13642 323 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 TNFAIP8L3Q5GJ75 292 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 OTPQ5XKR4 325 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 CD276Q5ZPR3 534 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 DHRS7BQ6IAN0 325 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-221ENST00000557293 C1orf94Q6P1W5 598 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 BLOC1S3Q6QNY0 202 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 DLEU7Q6UYE1 221 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 PDZD9Q8IXQ8 264 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 C1orf87Q8N0U7 546 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 PCYOX1LQ8NBM8 494 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 LRRC8CQ8TDW0 803 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 TMEM255BQ8WV15 326 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 SGTBQ96EQ0 304 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 WACQ9BTA9 647 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 THAP1Q9NVV9 213 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 PTTG3PQ9NZH4 202 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 ZNRD1Q9P1U0 126 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 ANGPT4Q9Y264 503 aa10.32□□□□□ -0.76
PSEN1-221ENST00000557293 LOC100653049A0A140TA62 436 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 A0A1W2PPL8 197 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 MEGF11A6BM72 1044 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 GMNCA6NCL1 334 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 OR6C6A6NF89 314 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 LRRC30A6NM36 301 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 IQCF6A8MYZ5 107 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 SGCEO43556 437 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 DOK2O60496 412 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 FAM20BO75063 409 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 KRT34O76011 436 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 DBHP09172 617 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 TOP3AQ13472 1001 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 MPPED2Q15777 294 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 RSPO1Q2MKA7 263 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 CCDC92Q53HC0 331 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 CCBE1Q6UXH8 406 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 Q6ZTK2 550 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 PPP1R35Q8TAP8 253 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 LRTOMTQ8WZ04 291 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 TAMM41Q96BW9 452 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 ZNF582Q96NG8 517 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 CPPED1Q9BRF8 314 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-221ENST00000557293 ERVK-18Q9QC07 812 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 HIF3AQ9Y2N7 669 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 USH1CQ9Y6N9 552 aa10.31□□□□□ -0.76
PSEN1-221ENST00000557293 FBP2O00757 339 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 NR2C1P13056 603 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 SELPLGQ14242 412 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 INTS11Q5TA45 600 aaKnown RBP10.3□□□□□ -0.76
PSEN1-221ENST00000557293 METTL11BQ5VVY1 283 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 SFRP4Q6FHJ7 346 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-221ENST00000557293 IGFN1Q86VF2 1251 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 FGFRL1Q8N441 504 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 GALNT4Q8N4A0 578 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
PSEN1-221ENST00000557293 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 FNDC8Q8TC99 324 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 SGCDQ92629 289 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 PHF21AQ96BD5 680 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 COG8Q96MW5 612 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 TECTBQ96PL2 329 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 TOR3AQ9H497 397 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 KIF17Q9P2E2 1029 aa10.3□□□□□ -0.76
PSEN1-221ENST00000557293 RNASEK-C17orf49H0YIS7 233 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 J3QW42 95 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 K7EIL1 84 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 LGALS8O00214 317 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 FPR3P25089 353 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 GABRA5P31644 462 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 CD200P41217 278 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
PSEN1-221ENST00000557293 GUCA1AP43080 201 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms