RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 APLNRP35414 380 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 MPV17P39210 176 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PSMB10P40306 273 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 HBA1P69905 142 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SLC35A2P78381 396 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 EGR4Q05215 589 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 CALCOCO2Q13137 446 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 HABP2Q14520 560 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF181Q2M3W8 571 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF404Q494X3 552 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SLC36A2Q495M3 483 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PXDC1Q5TGL8 231 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 METTL11BQ5VVY1 283 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 CARD17Q5XLA6 110 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 METAP1DQ6UB28 335 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 C5orf46Q6UWT4 87 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 RNF165Q6ZSG1 346 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 C1orf122Q6ZSJ8 110 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PXKQ7Z7A4 578 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 LCA5Q86VQ0 697 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 CALHM3Q86XJ0 350 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 VRK2Q86Y07 508 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 UEVLDQ8IX04 471 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF101Q8IZC7 436 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SCCPDHQ8NBX0 429 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ICA1LQ8NDH6 482 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ADPRHL1Q8NDY3 354 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SDR9C7Q8NEX9 313 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 OR8B3Q8NGG8 313 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 OR6N1Q8NGY5 312 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 CLHC1Q8NHS4 586 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 IPCEF1Q8WWN9 437 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 LHX4Q969G2 390 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 TAAR8Q969N4 342 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SLC41A3Q96GZ6 507 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 POM121L2Q96KW2 1035 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 TRNT1Q96Q11 434 aaKnown RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 OR8B2Q96RD0 313 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SH3GL3Q99963 347 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM246Q9BRR3 403 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ERP44Q9BS26 406 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 EMC6Q9BV81 110 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 GPR61Q9BZJ8 451 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ULBP2Q9BZM5 246 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 OR2J1Q9GZK6 312 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PPA2Q9H2U2 334 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 OR51I1Q9H343 314 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 RANBP3Q9H6Z4 567 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-223ENST00000557076 PPCSQ9HAB8 311 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 RAB18Q9NP72 206 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 GLTPQ9NZD2 209 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 ZNRD1Q9P1U0 126 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 SNX12Q9UMY4 172 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 MAB21L2Q9Y586 359 aa3.83□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM114B3SHH9 223 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 H0YIZ8 118 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 LSM1O15116 133 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 CRCPO75575 148 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 HPRP00739 348 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 LHBP01229 141 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 IFNW1P05000 195 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 GSTA1P08263 222 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 MMP7P09237 267 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 GKN3PP0CG01 181 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 IL7RP16871 459 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF26P17031 533 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 PRPS1L1P21108 318 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 STOMP27105 288 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 GTF2E2P29084 291 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 GRPRP30550 384 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 RPL4P36578 427 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 HPCAL1P37235 193 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 WNT5AP41221 380 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 CRATP43155 626 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 RPS5P46782 204 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SERPINB9P50453 376 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 CAV1Q03135 178 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 C2orf54Q08AI8 447 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 PSG7Q13046 419 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 UAP1Q16222 522 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SPATA46Q5T0L3 261 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 MRPL2Q5T653 305 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 FAM69AQ5T7M9 428 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SFRP4Q6FHJ7 346 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SLC2A7Q6PXP3 512 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 WDR88Q6ZMY6 472 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 TIFABQ6ZNK6 161 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 ZCCHC23Q6ZST2 131 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SLC16A14Q7RTX9 510 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 IGFN1Q86VF2 1251 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 RIMKLAQ8IXN7 391 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 OR2Z1Q8NG97 314 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms