RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 H2AFY2Q9P0M6 372 aaPredicted RBP15.05■□□□□ -0
SHMT2-225ENST00000556798 AASSQ9UDR5 926 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 CMAHPQ9Y471 501 aa15.05■□□□□ -0
SHMT2-225ENST00000556798 F5H5K5 113 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 RAD52P43351 418 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 SLC34A1Q06495 639 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 LRP11Q86VZ4 500 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 GID4Q8IVV7 300 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 PACRGLQ8N7B6 248 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 MRPL24Q96A35 216 aaKnown RBP15.04■□□□□ -0
SHMT2-225ENST00000556798 PERPQ96FX8 193 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 POFUT1Q9H488 388 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 PLK3Q9H4B4 646 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 RNPEPL1Q9HAU8 725 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 CENPMQ9NSP4 180 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 BEX4Q9NWD9 120 aaPredicted RBP15.04■□□□□ -0
SHMT2-225ENST00000556798 FAM118AQ9NWS6 357 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 MYEF2Q9P2K5 600 aaKnown RBP15.04■□□□□ -0
SHMT2-225ENST00000556798 ATPIF1Q9UII2 106 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 KLHDC2Q9Y2U9 406 aa15.04■□□□□ -0
SHMT2-225ENST00000556798 LOC100130705A0A1B0GUX0 176 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 OVOL3O00110 214 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 PTH2RP49190 550 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 ART1P52961 327 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 HCCSP53701 268 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 SNRPD2P62316 118 aaKnown RBP15.03■□□□□ -0
SHMT2-225ENST00000556798 EFNB3Q15768 340 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 SWI5Q1ZZU3 235 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 RSPO1Q2MKA7 263 aaPredicted RBP15.03■□□□□ -0
SHMT2-225ENST00000556798 KRTAP27-1Q3LI81 207 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 SHFQ7M4L6 423 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 SLC25A40Q8TBP6 338 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 ZNF582Q96NG8 517 aaPredicted RBP15.03■□□□□ -0
SHMT2-225ENST00000556798 RDH12Q96NR8 316 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 CNN2Q99439 309 aaKnown RBP15.03■□□□□ -0
SHMT2-225ENST00000556798 COPS4Q9BT78 406 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 ABHD6Q9BV23 337 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 C8orf4Q9NR00 106 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 DDX28Q9NUL7 540 aaKnown RBP15.03■□□□□ -0
SHMT2-225ENST00000556798 DUSP13Q9UII6 198 aa15.03■□□□□ -0
SHMT2-225ENST00000556798 AKAP9Q99996 3911 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 CREBBPQ92793 2442 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 TMEM129A0AVI4 362 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 SLC22A31A6NKX4 558 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 VSTM5A8MXK1 200 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 B9A039 149 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ICMTO60725 284 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 CLPTM1O96005 669 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ACSM4P0C7M7 580 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 PPP1CBP62140 327 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ECH1Q13011 328 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 GGTLC2Q14390 218 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 TAF13Q15543 124 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ARL9Q6T311 187 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 SLC16A9Q7RTY1 509 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ZNF555Q8NEP9 628 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 OTOSQ8NHW6 89 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 THEM6Q8WUY1 208 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 NRG4Q8WWG1 115 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 TTTY10Q9BZA0 68 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 OR2J1Q9GZK6 312 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ELOVL3Q9HB03 270 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 ADGRL4Q9HBW9 690 aa15.02■□□□□ -0
SHMT2-225ENST00000556798 OTOGQ6ZRI0 2925 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 A0A1W2PPW3 197 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF878C9JN71 531 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 M0R135 149 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 SLC16A6O15403 523 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 NDUFS7O75251 213 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 APOL3O95236 402 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 CLIC3O95833 236 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 LYNP07948 512 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 MPV17P39210 176 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 MAD2L1BPQ15013 274 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ALKBH6Q3KRA9 238 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 TMEM255AQ5JRV8 349 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 UNQ6126/PRO20091Q6UXV3 157 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 NAA40Q86UY6 237 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ENTHD1Q8IYW4 607 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 RFLNBQ8N5W9 214 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 OR51G2Q8NGK0 314 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
SHMT2-225ENST00000556798 CYGBQ8WWM9 190 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF799Q96GE5 643 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 DCLRE1CQ96SD1 692 aaKnown RBP15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF701Q9NV72 531 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-225ENST00000556798 TBCCD1Q9NVR7 557 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 COPS3Q9UNS2 423 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 STARD10Q9Y365 291 aa15.01□□□□□ -0.01
SHMT2-225ENST00000556798 ENTPD6O75354 484 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF250P15622 560 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 GABRB1P18505 474 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 ANOS1P23352 680 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 HTR1FP30939 366 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 ALDH3B1P43353 468 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 SLC6A9P48067 706 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 PRKXP51817 358 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 ATP5J2P56134 94 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 SNRPGP62308 76 aaKnown RBP15□□□□□ -0.01
SHMT2-225ENST00000556798 SLC35F2Q8IXU6 374 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms