RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ATP7BP35670 1465 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF318Q5VUA4 2279 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 ABCC3O15438 1527 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TRAV25A0A0B4J276 109 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 KBTBD11-OT1A0A1B0GTJ5 212 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 GOLGA8IPA6NC78 632 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 A8MUA0 341 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 H7C0C1 242 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 YKT6O15498 198 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 RAD51CO43502 376 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TSPAN13O95857 204 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 FAM228BP0C875 321 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 GZMAP12544 262 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CTRB1P17538 263 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 BCKDHBP21953 392 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CD1BP29016 333 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 GTF2H1P32780 548 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 SLC26A3P40879 764 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CSNK1EP49674 416 aaKnown RBP3.11□□□□□ -1.91
PRPF39-210ENST00000556718 STX17P56962 302 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 DSTNP60981 165 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 S100A12P80511 92 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF92Q03936 586 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 RAD51Q06609 339 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TWF1Q12792 350 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 HSP90AA4PQ58FG1 418 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 LY6G6FQ5SQ64 297 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CCNJQ5T5M9 372 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 C6orf183Q5T699 404 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CTRB2Q6GPI1 263 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 SPOPLQ6IQ16 392 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 IDO2Q6ZQW0 420 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 LINC00299Q6ZSB3 139 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 H2AFVQ71UI9 128 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TTC29Q8NA56 475 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-210ENST00000556718 FBXL13Q8NEE6 735 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 ZNF502Q8TBZ5 544 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 S100ZQ8WXG8 99 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 ESR2Q92731 530 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CIDECQ96AQ7 238 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CCDC127Q96BQ5 260 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 NRBF2Q96F24 287 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TEKT3Q9BXF9 490 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 OR11A1Q9GZK7 315 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 OR51M1Q9H341 326 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CLN8Q9UBY8 286 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 RAB26Q9ULW5 256 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 TP53TG3Q9ULZ0 132 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 HEY1Q9Y5J3 304 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 CHD2O14647 1828 aaKnown RBP3.11□□□□□ -1.91
PRPF39-210ENST00000556718 SAMD9LQ8IVG5 1584 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 PCDH11XQ9BZA7 1347 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 RLFQ13129 1914 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 IQGAP1P46940 1657 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 SHPRHQ149N8 1683 aa3.11□□□□□ -1.91
PRPF39-210ENST00000556718 BCL9O00512 1426 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 LRRK1Q38SD2 2015 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ERVK-7P63135 1459 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SYCP2Q9BX26 1530 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 MAST1Q9Y2H9 1570 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 IGLV3-10A0A075B6K4 115 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 A0A087WXM4 84 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 TRBV9A0A0B4J1U6 114 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 LOC105371267A0A1B0GV96 52 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 TMEM120BA0PK00 339 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 TRPC5OSA6NMA1 111 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 H0YJX3 145 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 H3BNH8 94 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 MRPS12O15235 138 aaKnown RBP3.1□□□□□ -1.91
PRPF39-210ENST00000556718 HDAC3O15379 428 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SLC31A2O15432 143 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 AQP9O43315 295 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 CHST1O43916 411 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SUPT7LO94864 414 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 KLHL2O95198 593 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 LY6G6DO95868 133 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ASS1P00966 412 aaKnown RBP3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SHBGP04278 402 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 RPS17P08708 135 aaKnown RBP3.1□□□□□ -1.91
PRPF39-210ENST00000556718 CSF3P09919 207 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 GKN3PP0CG01 181 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 PRKACAP17612 351 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 DCKP27707 260 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 HTR1EP28566 365 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SERPINB1P30740 379 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 RORCP51449 518 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 B2MP61769 119 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ACTA2P62736 377 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ACTG2P63267 376 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ACTC1P68032 377 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 ACTA1P68133 377 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 MRPS15P82914 257 aaKnown RBP3.1□□□□□ -1.91
PRPF39-210ENST00000556718 SELENBP1Q13228 472 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 PRPSAP1Q14558 356 aa3.1□□□□□ -1.91
PRPF39-210ENST00000556718 CLINT1Q14677 625 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms