RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 HOXC12P31275 282 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 RIN1Q13671 783 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 HHIPQ96QV1 700 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF286AQ9HBT8 521 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 CD207Q9UJ71 328 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 SRPK3Q9UPE1 567 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 SDCBPO00560 298 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 CBX7O95931 251 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF728P0DKX0 622 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 AGFG1P52594 562 aaKnown RBP13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 TCTN1Q2MV58 587 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 NKAIN2Q5VXU1 208 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 UQCC3Q6UW78 93 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 ENKD1Q9H0I2 346 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 CA10Q9NS85 328 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 CLDN17P56750 224 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ELAVL1Q15717 326 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF425Q6IV72 752 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 LHFPL5Q8TAF8 219 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 NMNAT2Q9BZQ4 307 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC17A5Q9NRA2 495 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 WNT11O96014 354 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 SERPINE2P07093 398 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 FUT5Q11128 374 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR52W1Q6IF63 320 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 OGFOD3Q6PK18 319 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 RNF128Q8TEB7 428 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 PIGTQ969N2 578 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 HS3ST3A1Q9Y663 406 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 URB1O60287 2271 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 PIGBOS1A0A0B4J2F0 54 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 TLCD2A6NGC4 264 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 TAAR5O14804 337 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 B3GALNT1O75752 331 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF44P15621 663 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 RPA2P15927 270 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 CASRP41180 1078 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ATP1B3P54709 279 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 HSF1Q00613 529 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 NPSR1Q6W5P4 371 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC30A7Q8NEW0 376 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR52H1Q8NGJ2 320 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 HAS2Q92819 552 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 EDAQ92838 391 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ST6GALNAC2Q9UJ37 374 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 PCDHGA9Q9Y5G4 932 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 CD38P28907 300 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 EFNA3P52797 238 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 Q6ZRG5 221 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR5T1Q8NG75 326 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR4D6Q8NGJ1 314 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ARL5BQ96KC2 179 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF681Q96N22 645 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ULBP2Q9BZM5 246 aa13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 MRM2Q9UI43 246 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
ARHGEF40-207ENST00000556399 ITGB2P05107 769 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 DBHP09172 617 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZGLP1P0C6A0 271 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 TBPP20226 339 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 DRD3P35462 400 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 SCAND1P57086 179 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 CLINT1Q14677 625 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 TMEM65Q6PI78 240 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR11H4Q8NGC9 324 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 NINJ1Q92982 152 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 TSLPQ969D9 159 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 NUDT9Q9BW91 350 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF223Q9UK11 482 aaPredicted RBP13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF175Q9Y473 711 aa13.58□□□□□ -0.23
ARHGEF40-207ENST00000556399 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 BPNT1O95861 308 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 TBXA2RP21731 343 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 IDH3GP51553 393 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZNF136P52737 540 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 PLGLB1Q02325 96 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 CHRNA9Q9UGM1 479 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 LRP12Q9Y561 859 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 NME2P1O60361 137 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 SLC34A2O95436 690 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 KCNK15Q9H427 330 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 A0A0B4J293 547 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZFAND5O76080 213 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 JTBO76095 146 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR14L1PQ8NHC6 308 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 MED29Q9NX70 200 aa13.58□□□□□ -0.24
ARHGEF40-207ENST00000556399 DDAH2O95865 285 aa13.57□□□□□ -0.24
ARHGEF40-207ENST00000556399 HTRA4P83105 476 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF40-207ENST00000556399 TUSC1Q2TAM9 212 aa13.57□□□□□ -0.24
ARHGEF40-207ENST00000556399 PLCXD3Q63HM9 321 aa13.57□□□□□ -0.24
ARHGEF40-207ENST00000556399 OPN5Q6U736 354 aa13.57□□□□□ -0.24
ARHGEF40-207ENST00000556399 FIP1L1Q6UN15 594 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms