RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SCRT2Q9NQ03 307 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 POLE4Q9NR33 117 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 SIGLEC8Q9NYZ4 499 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 VAPAQ9P0L0 249 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 WRAP73Q9P2S5 460 aaPredicted RBP2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 PISDQ9UG56 409 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 GNPTGQ9UJJ9 305 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 SCML2Q9UQR0 700 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 AK6Q9Y3D8 172 aaKnown RBP2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 GOLT1BQ9Y3E0 138 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 POLR3HQ9Y535 204 aaPredicted RBP2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 ALG5Q9Y673 324 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 UACAQ9BZF9 1416 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 PDS5BQ9NTI5 1447 aa2.41□□□□□ -2.02
MTHFD1-212ENST00000555858 DNMBPQ6XZF7 1577 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 VIRMAQ69YN4 1812 aaKnown RBP2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 FANCD2Q9BXW9 1451 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 NLRP1Q9C000 1473 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 CEP152O94986 1710 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 ARHGEF10O15013 1369 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 MSH6P52701 1360 aa2.4□□□□□ -2.02
MTHFD1-212ENST00000555858 IGHV3OR16-10A0A075B7F0 116 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 A0A087WYN8 130 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 IGHV2-70DA0A0C4DH43 119 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 A0A1B0GV90 55 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 A0A1B0GVL5 298 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 EPM2AB3EWF7 344 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 F5H6K3 240 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 G3V3Y1 287 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 H3BQF6 201 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 K7EP13 123 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 FOXE1O00358 373 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PRMT5O14744 637 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SLC16A4O15374 487 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 RS1O15537 224 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 DLEU1O43261 78 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PRKAB2O43741 272 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PLIN3O60664 434 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 UGT2B17O75795 530 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 VAPBO95292 243 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 BRI3O95415 125 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PSMG1O95456 288 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CLDN9O95484 217 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SERPINA1P01009 418 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 IFNA21P01568 189 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PCCAP05165 728 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 KLK3P07288 261 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CD55P08174 381 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CT45A10P0DMU9 189 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 NQO1P15559 274 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CD1EP15812 388 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CSNK2A2P19784 350 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SERPINA2P20848 420 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PSMB5P28074 263 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SLC6A1P30531 599 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 HNRNPH3P31942 346 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 RPL13AP40429 203 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 NPBWR2P48146 333 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 RFX3P48380 749 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ACOT2P49753 483 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 RPL14P50914 215 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 KPNA2P52292 529 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 CRIP2P52943 208 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 FGF8P55075 233 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 UCNP55089 124 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 TMEM33P57088 247 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ERVK11-1P61568 191 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 LSM6P62312 80 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SLC7A9P82251 487 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 MRPS22P82650 360 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 IFITM2Q01629 132 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SEMG2Q02383 582 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 KLRC3Q07444 240 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ST3GAL3Q11203 375 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ORC2Q13416 577 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ARL6IP1Q15041 203 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 TAF1AQ15573 450 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SLC9A3R2Q15599 337 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 OR4D1Q15615 310 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ZBTB6Q15916 424 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 POU2AF1Q16633 256 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 TMEM249Q2WGJ8 235 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ZNF658BQ4V348 819 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SBK1Q52WX2 424 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 C6orf226Q5I0X4 101 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SPIN3Q5JUX0 258 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 PPM1LQ5SGD2 360 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 C9orf64Q5T6V5 341 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 SYPL2Q5VXT5 272 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 TRIQKQ629K1 86 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ZNF57Q68EA5 555 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 OR2A2Q6IF42 318 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 MED27Q6P2C8 311 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 DNM1P34Q6PK57 102 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 TMEM107Q6UX40 140 aa2.4□□□□□ -2.03
MTHFD1-212ENST00000555858 ZNF836Q6ZNA1 936 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms