RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PID1Q7Z2X4 250 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ERASQ7Z444 233 aa2.58□□□□□ -2
SRP54-209ENST00000555746 GOLGA7Q7Z5G4 137 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CEACAM19Q7Z692 300 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ERICH1Q86X53 443 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ZGRF1Q86YA3 2104 aa2.58□□□□□ -2
SRP54-209ENST00000555746 GCNT2Q8N0V5 402 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SLC39A11Q8N1S5 342 aa2.58□□□□□ -2
SRP54-209ENST00000555746 OR4D6Q8NGJ1 314 aa2.58□□□□□ -2
SRP54-209ENST00000555746 OR51L1Q8NGJ5 315 aa2.58□□□□□ -2
SRP54-209ENST00000555746 OR5D18Q8NGL1 313 aa2.58□□□□□ -2
SRP54-209ENST00000555746 OR52N1Q8NH53 320 aa2.58□□□□□ -2
SRP54-209ENST00000555746 RHEBL1Q8TAI7 183 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PNPT1Q8TCS8 783 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 FGF14Q92915 247 aa2.58□□□□□ -2
SRP54-209ENST00000555746 EMG1Q92979 244 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 DLX4Q92988 240 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 S100PBPQ96BU1 408 aa2.58□□□□□ -2
SRP54-209ENST00000555746 RNF145Q96MT1 663 aa2.58□□□□□ -2
SRP54-209ENST00000555746 FAM173AQ9BQD7 235 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CENPKQ9BS16 269 aa2.58□□□□□ -2
SRP54-209ENST00000555746 TEKT3Q9BXF9 490 aa2.58□□□□□ -2
SRP54-209ENST00000555746 MRPL13Q9BYD1 178 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 ROPN1BQ9BZX4 212 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 TRIM9Q9C026 710 aa2.58□□□□□ -2
SRP54-209ENST00000555746 POLR3FQ9H1D9 316 aaPredicted RBP2.58□□□□□ -2
SRP54-209ENST00000555746 NXF3Q9H4D5 531 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 DYRK4Q9NR20 520 aa2.58□□□□□ -2
SRP54-209ENST00000555746 HEBP1Q9NRV9 189 aa2.58□□□□□ -2
SRP54-209ENST00000555746 UFSP2Q9NUQ7 469 aa2.58□□□□□ -2
SRP54-209ENST00000555746 RDH8Q9NYR8 311 aa2.58□□□□□ -2
SRP54-209ENST00000555746 SLC17A7Q9P2U7 560 aa2.58□□□□□ -2
SRP54-209ENST00000555746 ABCD2Q9UBJ2 740 aa2.58□□□□□ -2
SRP54-209ENST00000555746 PISDQ9UG56 409 aa2.58□□□□□ -2
SRP54-209ENST00000555746 NDRG2Q9UN36 371 aaKnown RBP2.58□□□□□ -2
SRP54-209ENST00000555746 CA5BQ9Y2D0 317 aa2.58□□□□□ -2
SRP54-209ENST00000555746 OR10H1Q9Y4A9 318 aa2.58□□□□□ -2
SRP54-209ENST00000555746 CLUHO75153 1309 aa2.58□□□□□ -2
SRP54-209ENST00000555746 NSD1Q96L73 2696 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 FABP12A6NFH5 140 aa2.57□□□□□ -2
SRP54-209ENST00000555746 TMEM114B3SHH9 223 aa2.57□□□□□ -2
SRP54-209ENST00000555746 NPIPA7E9PJI5 369 aa2.57□□□□□ -2
SRP54-209ENST00000555746 TEX46H3BTG2 121 aa2.57□□□□□ -2
SRP54-209ENST00000555746 EI24O14681 340 aa2.57□□□□□ -2
SRP54-209ENST00000555746 TOX3O15405 576 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 CFLARO15519 480 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ADAM12O43184 909 aa2.57□□□□□ -2
SRP54-209ENST00000555746 UPK3AO75631 287 aa2.57□□□□□ -2
SRP54-209ENST00000555746 OR4F21O95013 312 aa2.57□□□□□ -2
SRP54-209ENST00000555746 H6PDO95479 791 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SNAP29O95721 258 aa2.57□□□□□ -2
SRP54-209ENST00000555746 APOC1P02654 83 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SERPINA5P05154 406 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CALB1P05937 261 aa2.57□□□□□ -2
SRP54-209ENST00000555746 HOXB7P09629 217 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC35E2BP0CK96 405 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC35E2P0CK97 266 aa2.57□□□□□ -2
SRP54-209ENST00000555746 NPIPA8P0DM63 369 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CD99P14209 185 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ZNF7P17097 686 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 IGFBP5P24593 272 aa2.57□□□□□ -2
SRP54-209ENST00000555746 DPP4P27487 766 aa2.57□□□□□ -2
SRP54-209ENST00000555746 MAS1LP35410 378 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PCK1P35558 622 aa2.57□□□□□ -2
SRP54-209ENST00000555746 BRCC3P46736 316 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CAPZBP47756 277 aa2.57□□□□□ -2
SRP54-209ENST00000555746 TMED10P49755 219 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 PPT1P50897 306 aa2.57□□□□□ -2
SRP54-209ENST00000555746 MFAP2P55001 183 aa2.57□□□□□ -2
SRP54-209ENST00000555746 AP1S2P56377 157 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SEC61GP60059 68 aa2.57□□□□□ -2
SRP54-209ENST00000555746 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 ATP6V0D1P61421 351 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PITPNAQ00169 270 aa2.57□□□□□ -2
SRP54-209ENST00000555746 MYBPC1Q00872 1141 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CNTN2Q02246 1040 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ZNF85Q03923 595 aa2.57□□□□□ -2
SRP54-209ENST00000555746 KLRC3Q07444 240 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLAMF1Q13291 335 aa2.57□□□□□ -2
SRP54-209ENST00000555746 LTB4RQ15722 352 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CHI3L2Q15782 390 aa2.57□□□□□ -2
SRP54-209ENST00000555746 C5orf64Q2M2E5 130 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CHRFAM7AQ494W8 412 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PTPN20Q4JDL3 420 aa2.57□□□□□ -2
SRP54-209ENST00000555746 EIPR1Q53HC9 387 aa2.57□□□□□ -2
SRP54-209ENST00000555746 C5orf47Q569G3 176 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CTSL3PQ5NE16 218 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ACER2Q5QJU3 275 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CELF3Q5SZQ8 465 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 CCNJQ5T5M9 372 aa2.57□□□□□ -2
SRP54-209ENST00000555746 GPR107Q5VW38 600 aa2.57□□□□□ -2
SRP54-209ENST00000555746 LIPKQ5VXJ0 399 aa2.57□□□□□ -2
SRP54-209ENST00000555746 TIGD3Q6B0B8 471 aa2.57□□□□□ -2
SRP54-209ENST00000555746 OR5M10Q6IEU7 315 aa2.57□□□□□ -2
SRP54-209ENST00000555746 RNASEKQ6P5S7 137 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 TMEM220Q6QAJ8 160 aa2.57□□□□□ -2
SRP54-209ENST00000555746 APOOLQ6UXV4 268 aa2.57□□□□□ -2
SRP54-209ENST00000555746 Q6ZPB1 254 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 Q6ZR54 194 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PGAP1Q75T13 922 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms