RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ST7LQ8TDW4 575 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 L3HYPDHQ96EM0 354 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 FCRL1Q96LA6 429 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TSSK3Q96PN8 268 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 OR7D2Q96RA2 312 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TAPBPLQ9BX59 468 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 DENND2DQ9H6A0 471 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 KRCC1Q9NPI7 259 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 HINT3Q9NQE9 182 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 EXOSC3Q9NQT5 275 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 B3GNT2Q9NY97 397 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 NKIRAS2Q9NYR9 191 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 TMEM216Q9P0N5 145 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 BAIAP2L1Q9UHR4 511 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 ATP6V1HQ9UI12 483 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 OSGIN1Q9UJX0 560 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 RASD1Q9Y272 281 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 UTP11Q9Y3A2 253 aaKnown RBP4.08□□□□□ -1.76
ATXN3-228ENST00000554592 WIPI2Q9Y4P8 454 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 AUP1Q9Y679 476 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 SESN1Q9Y6P5 492 aa4.08□□□□□ -1.76
ATXN3-228ENST00000554592 DSPPQ9NZW4 1301 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 A0A087WUV0 522 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 IGHV1-69-2A0A0G2JMI3 117 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 A0A1W2PPW3 197 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CLPSL1A2RUU4 121 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ERICH4A6NGS2 130 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 TRIM49D1C9J1S8 452 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CLDN25C9JDP6 229 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 FAAHO00519 579 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 PIN1P1O15428 100 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 RAD51CO43502 376 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 TRAF3IP2O43734 574 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SCN2BO60939 215 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 NDUFB4O95168 129 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 NDUFA7O95182 113 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 NGFP01138 241 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 UROSP10746 265 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 LAMP1P11279 417 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 UQCRBP14927 111 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SELEP16581 610 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SDC1P18827 310 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CXCR1P25024 350 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 HPCAL1P37235 193 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 MAGEB1P43366 347 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 LINC00205P59089 165 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 KCNJ10P78508 379 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CCL8P80075 99 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 LCN2P80188 198 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF154Q13106 437 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 HNF4GQ14541 408 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 OR7A5Q15622 319 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 GSG1Q2KHT4 349 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 HFEQ30201 348 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ATP6AP1LQ52LC2 224 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 RFTN2Q52LD8 501 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 KLF17Q5JT82 389 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 VAX1Q5SQQ9 334 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 TIFABQ6ZNK6 161 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 COLCA1Q6ZS62 124 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 Q6ZTK2 550 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 C6orf120Q7Z4R8 191 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CROCCP2Q86T23 111 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 GPR137CQ8N3F9 429 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CCNYL1Q8N7R7 359 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SCCPDHQ8NBX0 429 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 OR5D16Q8NGK9 328 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CLHC1Q8NHS4 586 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SFXN5Q8TD22 340 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 MGARPQ8TDB4 240 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 AENQ8WTP8 325 aaKnown RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SGCDQ92629 289 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 GTF3AQ92664 365 aaKnown RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CCDC126Q96EE4 140 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ELMOD3Q96FG2 381 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 PGAM5Q96HS1 289 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ALKBH3Q96Q83 286 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SLC30A2Q9BRI3 323 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SRSF8Q9BRL6 282 aaKnown RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ZNF350Q9GZX5 532 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 KCNN2Q9H2S1 579 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 MMP26Q9NRE1 261 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 POLE3Q9NRF9 147 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 EXD2Q9NVH0 621 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 ATAD3AQ9NVI7 634 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 SLCO1C1Q9NYB5 712 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 TAAR3PQ9P1P4 343 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 MYEF2Q9P2K5 600 aaKnown RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 FBXL17Q9UF56 701 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 LEF1Q9UJU2 399 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 PURGQ9UJV8 347 aaKnown RBP4.07□□□□□ -1.76
ATXN3-228ENST00000554592 FBXL3Q9UKT7 428 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 TMED5Q9Y3A6 229 aa4.07□□□□□ -1.76
ATXN3-228ENST00000554592 CFAP73A6NFT4 308 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms