RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MYH9P35579 1960 aaKnown RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TRAV26-1A0A087WT03 109 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 A0A087WUJ7 227 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 A0A0A6YYC8 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TGIF2-C20orf24A0A0A6YYL0 155 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ZCWPW2A0A1B0GU75 182 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SPAARA0A1B0GVQ0 90 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM213A2RRL7 107 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 VSTM2BA6NLU5 285 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 HSPB2A8KAH6 182 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 C9J4A7 227 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 H3BN98 237 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PYCARD-AS1I3L0S3 204 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 I3L1I5 382 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 GFYI3L273 518 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 K7ERI5 159 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 M0R036 132 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ACOT8O14734 319 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CLIC2O15247 247 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 EMC8O43402 210 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR2T1O43869 369 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SOX15O60248 233 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ATP6AP2O75787 350 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 FAM155BO75949 473 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TSPAN13O95857 204 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TOMM40O96008 361 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CFDP00746 253 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ARG1P05089 322 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SNRPCP09234 159 aaKnown RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ABOP16442 354 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 FUT1P19526 365 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PCMT1P22061 227 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CYP2F1P24903 491 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PSMB5P28074 263 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 S100A7P31151 101 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RPA3P35244 121 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RPL21P46778 160 aaKnown RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 LGALS7P47929 136 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RAB9AP51151 201 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CTSCP53634 463 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SNU13P55769 128 aaKnown RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 NCS1P62166 190 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 NKX6-1P78426 367 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 FAM3AP98173 230 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CDK6Q00534 326 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PSG6Q00889 435 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SP4Q02446 784 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 AESQ08117 197 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 C2orf80Q0P641 193 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 JOSD1Q15040 202 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PGM5Q15124 567 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 HSPB2Q16082 182 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RBBP7Q16576 425 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM241Q24JQ0 296 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PGGHGQ32M88 737 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 AMZ1Q400G9 498 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 GLYR1Q49A26 553 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OCIAD2Q56VL3 154 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CBWD3Q5JTY5 395 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CBWD5Q5RIA9 395 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 DCAF12L1Q5VU92 463 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM236Q5W0B7 351 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RHBDF2Q6PJF5 856 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PRSS55Q6UWB4 352 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM107Q6UX40 140 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RTN4RL2Q86UN3 420 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CRLF3Q8IUI8 442 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 LINC00346Q8IVM7 164 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 BOD1L2Q8IYS8 172 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SLC22A15Q8IZD6 547 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 BATF2Q8N1L9 274 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM156Q8N614 296 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ATP6V1C2Q8NEY4 427 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR4E2Q8NGC2 313 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR2AP1Q8NGE2 309 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR5M9Q8NGP3 310 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR1K1Q8NGR3 316 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR51F2Q8NH61 342 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 STT3BQ8TCJ2 826 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 APH1BQ8WW43 257 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 RAB40AQ8WXH6 277 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 BCL2L2Q92843 193 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SMARCD2Q92925 531 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ANKRD9Q96BM1 317 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ORAI1Q96D31 301 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SCRN2Q96FV2 425 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PGAM5Q96HS1 289 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CXorf58Q96LI9 332 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 WDFY2Q96P53 400 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR2M4Q96R27 311 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 OR52E6Q96RD3 313 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CD180Q99467 661 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CHRDL1Q9BU40 450 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ACTR3CQ9C0K3 210 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 C20orf85Q9H1P6 137 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 MED28Q9H204 178 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ABCG5Q9H222 651 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms