RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PKD1L2Q7Z442 2459 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 A0A1W2PPL8 197 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 TNFSF13O75888 250 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 TPPPO94811 219 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 GPANK1O95872 356 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 PNPP00491 289 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 INHBBP09529 407 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 H2BFMP0C1H6 154 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF182P17025 639 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 TUBG1P23258 451 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 EDNRAP25101 427 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 SOX6P35712 828 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 KIR3DL2P43630 455 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 SLC36A2Q495M3 483 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ACSM3Q53FZ2 586 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 CCDC92Q53HC0 331 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 C1orf185Q5T7R7 199 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 OR7E24Q6IFN5 339 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF529Q6P280 563 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 LRRN1Q6UXK5 716 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 CFAP77Q6ZQR2 320 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 SEM1Q6ZVN7 128 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 NUFIP2Q7Z417 695 aaKnown RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF100Q8IYN0 542 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 GABRG1Q8N1C3 465 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 PARP16Q8N5Y8 322 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ACOT12Q8WYK0 555 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 RGP1Q92546 391 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 BCL2L2Q92843 193 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 WDFY2Q96P53 400 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 DERL3Q96Q80 235 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 TSC22D3Q99576 134 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ATF6BQ99941 703 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 RBM24Q9BX46 236 aaKnown RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 RERGLQ9H628 205 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 SEC61A2Q9H9S3 476 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 TUBG2Q9NRH3 451 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 SNTG1Q9NSN8 517 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF224Q9NZL3 707 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF629Q9UEG4 869 aaPredicted RBP9.54□□□□□ -0.88
PABPN1-203ENST00000553960 IKZF2Q9UKS7 526 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 FAM215AQ9Y5M1 114 aa9.54□□□□□ -0.88
PABPN1-203ENST00000553960 ATMQ13315 3056 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 TMEM269A0A1B0GVZ9 245 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 LOC110117498-PIK3R3F6TDL0 507 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SGCEO43556 437 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 WISP2O76076 250 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 UBL3O95164 117 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 APEX1P27695 318 aaKnown RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 CDAP32320 146 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 RPS19P39019 145 aaKnown RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 RORCP51449 518 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 DBPQ10586 325 aaPredicted RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 MOGQ16653 247 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 WDR38Q5JTN6 314 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 CARD17Q5XLA6 110 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 ARL9Q6T311 187 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 C1orf174Q8IYL3 243 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 NDNFQ8TB73 568 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SMAP2Q8WU79 429 aaPredicted RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SPTSSAQ969W0 71 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SPSB4Q96A44 273 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SNRNP40Q96DI7 357 aaKnown RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 ZNF75AQ96N20 296 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 OR2H1Q9GZK4 316 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 PIGMQ9H3S5 423 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 EMC7Q9NPA0 242 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 OR52A1Q9UKL2 312 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 FOXJ3Q9UPW0 622 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 SLC22A13Q9Y226 551 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 PMF1-BGLAPU3KQ54 211 aa9.53□□□□□ -0.88
PABPN1-203ENST00000553960 RP1L1Q8IWN7 2480 aaPredicted RBP9.53□□□□□ -0.88
PABPN1-203ENST00000553960 MEGF11A6BM72 1044 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 E9PLN8 166 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 PRRG2O14669 202 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 MSTNO14793 375 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 RER1O15258 196 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 TTRP02766 147 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 SERPINA5P05154 406 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ITGA5P08648 1049 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 PSMB1P20618 241 aaKnown RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 PTBP1P26599 531 aaKnown RBP eCLIP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 CAPZA1P52907 286 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ARF1P84077 181 aaKnown RBP9.52□□□□□ -0.89
PABPN1-203ENST00000553960 RBPJQ06330 500 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 SGCAQ16586 387 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF404Q494X3 552 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ZBTB37Q5TC79 503 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 C22orf42Q6IC83 251 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 KLHL24Q6TFL4 600 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 RPTNQ6XPR3 784 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF813Q6ZN06 617 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 BEND4Q6ZU67 534 aa9.52□□□□□ -0.89
PABPN1-203ENST00000553960 P4HA3Q7Z4N8 544 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms