RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GDI2P50395 445 aaKnown RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 TPTEP56180 551 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 MLLT11Q13015 90 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 TBC1D28Q2M2D7 210 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 TP53I3Q53FA7 332 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ZNF684Q5T5D7 378 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 DRAM2Q6UX65 266 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 SSX6Q7RTT6 188 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 MDP1Q86V88 176 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 IL17RDQ8NFM7 739 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 SPRYD4Q8WW59 207 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 DOK1Q99704 481 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ZNF649Q9BS31 505 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 TTTY10Q9BZA0 68 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ELOVL3Q9HB03 270 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ACOXLQ9NUZ1 547 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 CRNNQ9UBG3 495 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
SHMT2-210ENST00000553950 SLC25A15Q9Y619 301 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 M0R135 149 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 SERPINA5P05154 406 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 JUNBP17275 347 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-210ENST00000553950 PSMB9P28065 219 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 OTX1P32242 354 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-210ENST00000553950 MMP16P51512 607 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 HCCSP53701 268 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 FAM27E3Q08E93 113 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 NEDD8Q15843 81 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 OR2G6Q5TZ20 316 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-210ENST00000553950 UFD1Q92890 307 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 MUL1Q969V5 352 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF799Q96GE5 643 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 COG8Q96MW5 612 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 AMELYQ99218 206 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 BABAM2Q9NXR7 383 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 MRM2Q9UI43 246 aaKnown RBP12.64□□□□□ -0.39
SHMT2-210ENST00000553950 R4GMQ9 66 aa12.64□□□□□ -0.39
SHMT2-210ENST00000553950 LOC110117498-PIK3R3F6TDL0 507 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF14P17017 642 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-210ENST00000553950 CD53P19397 219 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 CRYGSP22914 178 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 PSMA1P25786 263 aaKnown RBP12.63□□□□□ -0.39
SHMT2-210ENST00000553950 STOMP27105 288 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 MAP2K4P45985 399 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
SHMT2-210ENST00000553950 CX3CR1P49238 355 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 OR12D2P58182 307 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 GPR50Q13585 617 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 TIGD6Q17RP2 521 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-210ENST00000553950 LIPNQ5VXI9 398 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 FDX2Q6P4F2 183 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 RPL22L1Q6P5R6 122 aaKnown RBP12.63□□□□□ -0.39
SHMT2-210ENST00000553950 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF283Q8N7M2 679 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 WDR31Q8NA23 367 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 SLC30A7Q8NEW0 376 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 OR52H1Q8NGJ2 320 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 AKR7LQ8NHP1 331 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 THRSPQ92748 146 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 MGLLQ99685 303 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 KCNS3Q9BQ31 491 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 CDH20Q9HBT6 801 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF391Q9UJN7 358 aa12.63□□□□□ -0.39
SHMT2-210ENST00000553950 ZNF462Q96JM2 2506 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 CFAP46Q8IYW2 2715 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 TMEM269A0A1B0GVZ9 245 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 AGFG2O95081 481 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 CD1AP06126 327 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 LCKP06239 509 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 ADRA2AP08913 450 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 UBCP0CG48 685 aaKnown RBP12.62□□□□□ -0.39
SHMT2-210ENST00000553950 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 SLC6A9P48067 706 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-210ENST00000553950 CCR9P51686 369 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 TUBA1BP68363 451 aa12.62□□□□□ -0.39
SHMT2-210ENST00000553950 RAB39AQ14964 217 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms