RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZNF600Q6ZNG1 722 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 TPGS1Q6ZTW0 290 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 COX15Q7KZN9 410 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 BHLHA15Q7RTS1 189 aaPredicted RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 OAFQ86UD1 273 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SLC25A42Q86VD7 318 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 THOC6Q86W42 341 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 BBS7Q8IWZ6 715 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SKA3Q8IX90 412 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RDH10Q8IZV5 341 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ARRDC1Q8N5I2 433 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 OR6T1Q8NGN1 323 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 OR2A12Q8NGT7 310 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 LRRC29Q8WV35 223 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 TMEM54Q969K7 222 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CCDC127Q96BQ5 260 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 FAM122AQ96E09 287 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 PIK3IP1Q96FE7 263 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 DUS3LQ96G46 650 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 OR5M11Q96RB7 305 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CCDC28BQ9BUN5 200 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RNF126Q9BV68 326 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SPZ1Q9BXG8 430 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CHRNA10Q9GZZ6 450 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SLC38A1Q9H2H9 487 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ADNPQ9H2P0 1102 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 PARLQ9H300 379 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 RPF2Q9H7B2 306 aaKnown RBP1.73□□□□□ -2.13
SRP54-204ENST00000553923 PLEKHA1Q9HB21 404 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 C6orf50Q9HD87 102 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ISYNA1Q9NPH2 558 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 EXD2Q9NVH0 621 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 QPCTLQ9NXS2 382 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 SLC39A1Q9NY26 324 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 ANAPC11Q9NYG5 84 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 CALYQ9NYX4 217 aa1.73□□□□□ -2.13
SRP54-204ENST00000553923 PUS1Q9Y606 427 aaKnown RBP eCLIP1.73□□□□□ -2.13
SRP54-204ENST00000553923 MYH14Q7Z406 1995 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 A0A0G2JLM5 398 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 A0A0G2JRQ6 117 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 GOLGA8IPA6NC78 632 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SYCE1LA8MT33 242 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 F8VP50 259 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 MKRN2OSH3BPM6 223 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 KLRC4-KLRK1H3BQV0 150 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 K7EMT4 169 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 K7N7A8 449 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 M0QXV9 152 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 AGPAT2O15120 278 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 MRPS12O15235 138 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 SLC16A7O60669 478 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TBL1XO60907 577 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ZMPSTE24O75844 475 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TRAPPC6AO75865 159 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 PSMG1O95456 288 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ATP6V1G2O95670 118 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SNAP29O95721 258 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 AIFM1O95831 613 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 EIF4EP06730 217 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 MELTFP08582 738 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 OR8U9P0C7N5 309 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SLC35E2BP0CK96 405 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FOLR1P15328 257 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 HLA-GP17693 338 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 RAB4AP20338 218 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 AK4P27144 223 aaPredicted RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 TEAD1P28347 426 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 AQP1P29972 269 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ARL2P36404 184 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 P2RY2P41231 377 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 MAGEA3P43357 314 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 GPR6P46095 362 aaPredicted RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 RND2P52198 227 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TAS2R60P59551 318 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 OR2B8PP59922 312 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TSPAN5P62079 268 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 RAB31Q13636 194 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TPBGQ13641 420 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FLOT2Q14254 428 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TGIF1Q15583 401 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ZNHIT3Q15649 155 aaPredicted RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 ATP6AP1Q15904 470 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 POU2AF1Q16633 256 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 NRF1Q16656 503 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 EXOC3L4Q17RC7 722 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 PGGHGQ32M88 737 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CCDC14Q49A88 953 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 IDNKQ5T6J7 187 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CPTPQ5TA50 214 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 UBE2UQ5VVX9 321 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 RESP18Q5W5W9 173 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 LCN12Q6JVE5 192 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CLEC18BQ6UXF7 455 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 MBOAT2Q6ZWT7 520 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 DCXRQ7Z4W1 244 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 NAXDQ8IW45 347 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 C12orf56Q8IXR9 622 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FAM71AQ8IYT1 594 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CBR4Q8N4T8 237 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ATPAF2Q8N5M1 289 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms