RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 GP1BBP13224 206 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TPT1P13693 172 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 MAOAP21397 527 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 CXCR1P25024 350 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 DLSTP36957 453 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 CBX5P45973 191 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC6A9P48067 706 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 FNTBP49356 437 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 HOXA1P49639 335 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ARL4DP49703 201 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 DAP3P51398 398 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PRKXP51817 358 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 LBX1P52954 281 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PNLIPRP2P54317 469 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC26A5P58743 744 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 EIF5AP63241 154 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 CXADRP78310 365 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ADAM8P78325 824 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 S100A12P80511 92 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 QRFPP83859 136 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 MC2RQ01718 297 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZNF117Q03924 483 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 MFGE8Q08431 387 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 FZD2Q14332 565 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 EBPQ15125 230 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 NR0B2Q15466 257 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SURF2Q15527 256 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 INPP5JQ15735 1006 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 MICBQ29980 383 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 HFEQ30201 348 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 GLYATL3Q5SZD4 288 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PRAMEF17Q5VTA0 474 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 C1orf140Q5VVS0 124 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 KIAA0895LQ68EN5 471 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ELP2Q6IA86 826 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 DHRS7BQ6IAN0 325 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 CBLN3Q6UW01 205 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 Q6ZSR6 202 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 RD3Q7Z3Z2 195 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 REC114Q7Z4M0 266 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 C17orf82Q86X59 251 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 HOGA1Q86XE5 327 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SPAG16Q8N0X2 631 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC22A18ASQ8N1D0 253 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 BPIFB2Q8N4F0 458 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC22A24Q8N4F4 322 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 IL22RA1Q8N6P7 574 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZNF441Q8N8Z8 693 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 INO80EQ8NBZ0 244 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ADPRHL1Q8NDY3 354 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TMEM185AQ8NFB2 350 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZNF563Q8TA94 476 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 THAP6Q8TBB0 222 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ST7LQ8TDW4 575 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ELP5Q8TE02 316 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 DOK4Q8TEW6 326 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PTPMT1Q8WUK0 201 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 RNF138Q8WVD3 245 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PPP1R1CQ8WVI7 109 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 RNF133Q8WVZ7 376 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TMEM234Q8WY98 164 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ST8SIA1Q92185 356 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ATOH1Q92858 354 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 BADQ92934 168 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ARL11Q969Q4 196 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZBTB8AQ96BR9 441 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ZNF775Q96BV0 537 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 ANAPC16Q96DE5 110 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SAT2Q96F10 170 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 PIK3IP1Q96FE7 263 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 LRRC46Q96FV0 321 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC25A44Q96H78 314 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SCGB3A2Q96PL1 93 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SMAD5Q99717 465 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 SLC6A7Q99884 636 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 VRK1Q99986 396 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 KXD1Q9BQD3 176 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 C1QTNF6Q9BXI9 259 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TINAGL1Q9GZM7 467 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 NXF5Q9H1B4 397 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 RAB18Q9NP72 206 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 G6PC2Q9NQR9 355 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 WSB2Q9NYS7 404 aaPredicted RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TAS2R4Q9NYW5 299 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TAS2R3Q9NYW6 316 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 DNAJB11Q9UBS4 358 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 MSRAQ9UJ68 235 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 FBXL2Q9UKC9 423 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 NOP16Q9Y3C1 178 aaKnown RBP4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 POMT1Q9Y6A1 747 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 EML5Q05BV3 1969 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 FANCMQ8IYD8 2048 aa4.7□□□□□ -1.66
TMEM55B-204ENST00000553602 TP53BP1Q12888 1972 aaPredicted RBP4.69□□□□□ -1.66
TMEM55B-204ENST00000553602 TMED7-TICAM2A0A0A6YYA0 188 aa4.69□□□□□ -1.66
TMEM55B-204ENST00000553602 A0A1B0GTH9 108 aa4.69□□□□□ -1.66
TMEM55B-204ENST00000553602 TCRBV16S1A1N1A0A5B0 115 aa4.69□□□□□ -1.66
TMEM55B-204ENST00000553602 PQLC2LA1A4F0 135 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms