RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 LRRC29Q8WV35 223 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 PDXPQ96GD0 296 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF317Q96PQ6 595 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-210ENST00000553455 LZTS2Q9BRK4 669 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 TUBG2Q9NRH3 451 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 MTFP1Q9UDX5 166 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 A6NDN8 102 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 H7C1H1 209 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 RDH16O75452 317 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 SLC25A14O95258 325 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-210ENST00000553455 ERGP11308 486 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 RAB4AP20338 218 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 RAD51Q06609 339 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 SLAQ13239 276 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 NCF4Q15080 339 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 UBE2SQ16763 222 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 TRMT5Q32P41 509 aaKnown RBP3.13□□□□□ -1.91
SYNE2-210ENST00000553455 BEX5Q5H9J7 111 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 TPTE2P1Q5T6R2 138 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 OTUD6AQ7L8S5 288 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 ABHD12BQ7Z5M8 362 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-210ENST00000553455 METTL13Q8N6R0 699 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 OR51E1Q8TCB6 317 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 ZDHHC4Q9NPG8 344 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 FAM49BQ9NUQ9 324 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 MROH7-TTC4A0A0A0MT08 1334 aa3.13□□□□□ -1.91
SYNE2-210ENST00000553455 TSPAN11A1L157 253 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 H7C0C1 242 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 GABRPO00591 440 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ZBTB5O15062 677 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 SIVA1O15304 175 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 RALBP11234 206 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF32P17041 273 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 IGFBP3P17936 291 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 TCN2P20062 427 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 RAB3AP20336 220 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 RFC3P40938 356 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 P2RX1P51575 399 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 UBE2NP61088 152 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 LOXL1Q08397 574 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 IFT88Q13099 833 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 IRF4Q15306 451 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 CHRFAM7AQ494W8 412 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ORMDL2Q53FV1 153 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 Q5W150 140 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 MRPL55Q7Z7F7 128 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 PRSS58Q8IYP2 241 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 FAM71AQ8IYT1 594 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ARRDC1Q8N5I2 433 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 LRRC75AQ8NAA5 344 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 PIFOQ8TCI5 191 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 GPX8Q8TED1 209 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 C15orf40Q8WUR7 153 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF707Q96C28 371 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 NRBF2Q96F24 287 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 JSRP1Q96MG2 331 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 RNF145Q96MT1 663 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 FOXC2Q99958 501 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 IQCGQ9H095 443 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 EDA2RQ9HAV5 297 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 CTSFQ9UBX1 484 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 TRMT112Q9UI30 125 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 SAR1BQ9Y6B6 198 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 GPATCH8Q9UKJ3 1502 aaKnown RBP3.12□□□□□ -1.91
SYNE2-210ENST00000553455 NISCHQ9Y2I1 1504 aa3.12□□□□□ -1.91
SYNE2-210ENST00000553455 ADAMTS13Q76LX8 1427 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 A0A1W2PP18 115 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF324O75467 553 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 PRB2P02812 416 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 CTSLP07711 333 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 SSTR5P35346 364 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 MAGEA1P43355 309 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 HCAR3P49019 387 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 CLDN18P56856 261 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 VSX2P58304 361 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 PFN3P60673 137 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 RPEL1Q2QD12 228 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 AVPI1Q5T686 147 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 PLCXD3Q63HM9 321 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 WDR86Q86TI4 376 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 RIMKLAQ8IXN7 391 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 RPEQ96AT9 228 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 ISG20Q96AZ6 181 aaKnown RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 FOPNLQ96NB1 174 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 PIGUQ9H490 435 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 C8orf33Q9H7E9 229 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF430Q9H8G1 570 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 PXMP2Q9NR77 195 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 TSSC4Q9Y5U2 329 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-210ENST00000553455 IGSF9BQ9UPX0 1349 aa3.11□□□□□ -1.91
SYNE2-210ENST00000553455 IGKV1-8A0A0C4DH67 115 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 A0A0U1RQV1 116 aa3.1□□□□□ -1.91
SYNE2-210ENST00000553455 DNASE2O00115 360 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms