RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MSL2Q9HCI7 577 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 PRPF19Q9UMS4 504 aaKnown RBP11□□□□□ -0.65
ACTN1-207ENST00000553290 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 LHFPL6Q9Y693 200 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 CDH10Q9Y6N8 788 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 DNHD1Q96M86 4753 aa11□□□□□ -0.65
ACTN1-207ENST00000553290 TCRBV5S2A0A599 114 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 OR6C68A6NDL8 312 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 FAM157AC9JC47 383 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 UBOX5O94941 541 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 CCNB2O95067 398 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 GPANK1O95872 356 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 DBHP09172 617 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 T-ENOLP0DO92 83 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 RAC2P15153 192 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 TNFSF4P23510 183 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 SRP14P37108 136 aaKnown RBP10.99□□□□□ -0.65
ACTN1-207ENST00000553290 TNFAIP6P98066 277 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-207ENST00000553290 SLC35F1Q5T1Q4 408 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 ACSM5Q6NUN0 579 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 RINLQ6ZS11 566 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-207ENST00000553290 PEG10Q86TG7 708 aaKnown RBP10.99□□□□□ -0.65
ACTN1-207ENST00000553290 SDR9C7Q8NEX9 313 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 OR52E2Q8NGJ4 325 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 OR4C15Q8NGM1 316 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 OR2AJ1Q8NGZ0 328 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-207ENST00000553290 BTBD10Q9BSF8 475 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 CDADC1Q9BWV3 514 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 C1orf21Q9H246 121 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 EGLN3Q9H6Z9 239 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 HIF1ANQ9NWT6 349 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 IL20Q9NYY1 176 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 CACNG2Q9Y698 323 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 TANC2Q9HCD6 1990 aa10.99□□□□□ -0.65
ACTN1-207ENST00000553290 TRAV20A0A0B4J274 112 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 BHLHE40O14503 412 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 SURF4O15260 269 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 GASTP01350 101 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 HLA-DQA2P01906 255 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 TNFRSF1AP19438 455 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 MS4A2Q01362 244 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.98□□□□□ -0.65
ACTN1-207ENST00000553290 ECH1Q13011 328 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 CLEC12AQ5QGZ9 265 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 OR2T5Q6IEZ7 315 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 ZNF770Q6IQ21 691 aaPredicted RBP10.98□□□□□ -0.65
ACTN1-207ENST00000553290 CORO6Q6QEF8 472 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 FBXW12Q6X9E4 464 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 RASSF6Q6ZTQ3 369 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 OR9Q2Q8NGE9 314 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 OR2T29Q8NH02 315 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 ASB9Q96DX5 294 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 LRGUKQ96M69 825 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 REEP1Q9H902 201 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 LPAR2Q9HBW0 351 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 IL19Q9UHD0 177 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 KCNG2Q9UJ96 466 aa10.98□□□□□ -0.65
ACTN1-207ENST00000553290 DEAF1O75398 565 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-207ENST00000553290 IGHV2-5P01817 119 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 RAP2AP10114 183 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 ZNF823P16415 610 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 GK3PQ14409 553 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 MICAQ29983 383 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 SLC18B1Q6NT16 456 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 SLC27A4Q6P1M0 643 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 Q6ZR03 302 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 AQP11Q8NBQ7 271 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 OR2Z1Q8NG97 314 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 OR2T4Q8NH00 348 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 PITX2Q99697 317 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 ATF6BQ99941 703 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 DGCR6LQ9BY27 220 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 FN3KQ9H479 309 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 TAS2R1Q9NYW7 299 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 PTTG3PQ9NZH4 202 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 CYB5R1Q9UHQ9 305 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 BAIAP2Q9UQB8 552 aa10.97□□□□□ -0.65
ACTN1-207ENST00000553290 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
ACTN1-207ENST00000553290 DYSFO75923 2080 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 GGT2P36268 569 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 TRAP1Q12931 704 aaKnown RBP10.96□□□□□ -0.65
ACTN1-207ENST00000553290 PPP1R8Q12972 351 aaKnown RBP10.96□□□□□ -0.65
ACTN1-207ENST00000553290 SCGB2A2Q13296 93 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 HLXQ14774 488 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-207ENST00000553290 RSPO1Q2MKA7 263 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-207ENST00000553290 KRTAP27-1Q3LI81 207 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 SPRNQ5BIV9 151 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 LIPNQ5VXI9 398 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 CFAP77Q6ZQR2 320 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 LINC00346Q8IVM7 164 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 PHC2Q8IXK0 858 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 LNX2Q8N448 690 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 TEX29Q8N6K0 151 aa10.96□□□□□ -0.65
ACTN1-207ENST00000553290 CYB561A3Q8NBI2 242 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms