RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SLC25A28Q96A46 364 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 PNPLA2Q96AD5 504 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 IP6K3Q96PC2 410 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 UTP23Q9BRU9 249 aaKnown RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 MARVELD1Q9BSK0 173 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF416Q9BWM5 594 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 NELFAQ9H3P2 528 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF703Q9H7S9 590 aaPredicted RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ABI3Q9P2A4 366 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 RCE1Q9Y256 329 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 FLVCR1Q9Y5Y0 555 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 NCOR1O75376 2440 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 LAMA1P25391 3075 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 SPAARA0A1B0GVQ0 90 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 LOC390937A0A1W2PQ73 354 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 GABARAPH6UMI1 98 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 LRP3O75074 770 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 TRAPPC6AO75865 159 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 GLSO94925 669 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 POU3F2P20265 443 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 CDK2P24941 298 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 HSD11B1P28845 292 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 GDNFP39905 211 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 POU3F4P49335 361 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 PRKXP51817 358 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF121P58317 390 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 HIST1H3AP68431 136 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 OR1C1Q15619 314 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 SGCAQ16586 387 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 C1orf100Q5SVJ3 147 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 HIST2H3PS2Q5TEC6 136 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 GLT8D1Q68CQ7 371 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 MTFR2Q6P444 385 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 HIST2H3AQ71DI3 136 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 RHOUQ7L0Q8 258 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 DTX1Q86Y01 620 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 TOMM5Q8N4H5 51 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 PLPP7Q8NBV4 271 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 MDS2Q8NDY4 140 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 OR8B12Q8NGG6 310 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 OR6F1Q8NGZ6 308 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 OR52I2Q8NH67 350 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 ROBO4Q8WZ75 1007 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 SLC7A6Q92536 515 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 FAM3DQ96BQ1 224 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 INTS12Q96CB8 462 aaKnown RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 S100A16Q96FQ6 103 aaKnown RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 ST6GAL2Q96JF0 529 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 C7orf50Q9BRJ6 194 aaKnown RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 ULBP2Q9BZM5 246 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 PLA2G3Q9NZ20 509 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 CGGBP1Q9UFW8 167 aaPredicted RBP10.16□□□□□ -0.78
RAB5C-208ENST00000551338 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
RAB5C-208ENST00000551338 LOC100289279A0A1B0GTE1 492 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 TMEM272A0A1B0GTI8 110 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 INMT-MINDY4F8WBC2 141 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 LDLRAD4O15165 306 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 SYT7O43581 403 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CTAG2O75638 210 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CCNKO75909 580 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 KRT33AO76009 404 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 TPPPO94811 219 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 KDM4BO94953 1096 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 HPNP05981 417 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 PTHLHP12272 177 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 HLA-DMAP28067 261 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 NTF4P34130 210 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 RFC3P40938 356 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CX3CR1P49238 355 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CARD18P57730 90 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 BTG1P62324 171 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 MRPS10P82664 201 aaKnown RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 SPOCK1Q08629 439 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 DYRK1AQ13627 763 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 TAF13Q15543 124 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 TATDN3Q17R31 274 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 C2orf76Q3KRA6 126 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 TMEM69Q5SWH9 247 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ATAD3CQ5T2N8 411 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ATP1A1-AS1Q5TC04 95 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 KRT74Q7RTS7 529 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 SULF2Q8IWU5 870 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 IL22RA1Q8N6P7 574 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 NKAIN3Q8N8D7 197 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 OR6M1Q8NGM8 313 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 OR1J2Q8NGS2 313 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ADAT3Q96EY9 351 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF845Q96IR2 970 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 FER1L6-AS2Q96M78 137 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 DPAGT1Q9H3H5 408 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 SLC17A5Q9NRA2 495 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF275Q9NSD4 429 aaPredicted RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF319Q9P2F9 582 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 CKLFQ9UBR5 152 aa10.15□□□□□ -0.78
RAB5C-208ENST00000551338 RBMX2Q9Y388 322 aaKnown RBP10.15□□□□□ -0.78
RAB5C-208ENST00000551338 A0A1B0GVI7 797 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms