RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 MRM3Q9HC36 420 aaKnown RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 AGPAT3Q9NRZ7 376 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF282Q9UDV7 671 aaPredicted RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 CFAP45Q9UL16 551 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 FLVCR2Q9UPI3 526 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 PRG3Q9Y2Y8 225 aaPredicted RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 GAKO14976 1311 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 LOC100506127A0A0U1RQW1 187 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 LOC100653049A0A140TA62 436 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 CIB4A0PJX0 185 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 A6NDX4 124 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 CENPXA8MT69 81 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 FAM166BA8MTA8 275 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF879B4DU55 563 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 POLR1CO15160 346 aaPredicted RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 KRT34O76011 436 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 HPRT1P00492 218 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 PCCAP05165 728 aaPredicted RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 GGT1P19440 569 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 CSNK2A2P19784 350 aaPredicted RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 WARSP23381 471 aaKnown RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 GABRR2P28476 465 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF136P52737 540 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 HADHBP55084 474 aaKnown RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF121P58317 390 aaPredicted RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 PRR3P79522 188 aaKnown RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 CDH17Q12864 832 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 STK11Q15831 433 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 Q3ZCU0 254 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 PTPN20Q4JDL3 420 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 FBXW12Q6X9E4 464 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 TRAM1L1Q8N609 369 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 Q8N9W7 124 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 NOXO1Q8NFA2 376 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 OR10AD1Q8NGE0 317 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 OR51G1Q8NGK1 321 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 OR4A15Q8NGL6 344 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 OR10G4Q8NGN3 311 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 ITFG1Q8TB96 612 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 APH1BQ8WW43 257 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 TMEM158Q8WZ71 300 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 ISOC2Q96AB3 205 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 MRGPRFQ96AM1 343 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 RPEQ96AT9 228 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 MSANTD3Q96H12 275 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 TMEM175Q9BSA9 504 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 CALN1Q9BXU9 219 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 TM6SF2Q9BZW4 377 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 PARP12Q9H0J9 701 aaKnown RBP2.76□□□□□ -1.97
SNRPF-202ENST00000549580 MCUBQ9NWR8 336 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 RPS6KB2Q9UBS0 482 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 KPTNQ9Y664 436 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 SCN2AQ99250 2005 aa2.76□□□□□ -1.97
SNRPF-202ENST00000549580 DENND4AQ7Z401 1863 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF646O15015 1829 aaPredicted RBP2.75□□□□□ -1.97
SNRPF-202ENST00000549580 MAP3K15Q6ZN16 1313 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 IGLV11-55A0A075B6I3 123 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 SLC22A20A6NK97 555 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 A8MU10 97 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 TRIM49D1C9J1S8 452 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 PSMD11O00231 422 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 NME4O00746 187 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 PLPP1O14494 284 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CD5LO43866 347 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 DNAH10OSP0CZ25 163 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CFHR2P36980 270 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CEACAM3P40198 252 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CEACAM6P40199 344 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 RPS10P46783 165 aaKnown RBP2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CYB561P49447 251 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 SERPINB8P50452 374 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CKAP4Q07065 602 aaKnown RBP2.75□□□□□ -1.97
SNRPF-202ENST00000549580 GABRA6Q16445 453 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 FAM83EQ2M2I3 478 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CHRFAM7AQ494W8 412 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 TPRG1LQ5T0D9 272 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 HES5Q5TA89 166 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 LIN9Q5TKA1 542 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ADNP2Q6IQ32 1131 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 WDR82Q6UXN9 313 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ASCL4Q6XD76 172 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 VKORC1L1Q8N0U8 176 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ARHGAP18Q8N392 663 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 GATSQ8NAP1 163 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 MDS2Q8NDY4 140 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF596Q8TC21 504 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 FAM131CQ96AQ9 280 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 NRBF2Q96F24 287 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ZIM3Q96PE6 472 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CHAC1Q9BUX1 264 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 SLC25A2Q9BXI2 301 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 PATZ1Q9HBE1 687 aaKnown RBP2.75□□□□□ -1.97
SNRPF-202ENST00000549580 ISYNA1Q9NPH2 558 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 FHOD3Q2V2M9 1422 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 CROCCQ5TZA2 2017 aa2.75□□□□□ -1.97
SNRPF-202ENST00000549580 MN1Q10571 1320 aaPredicted RBP2.74□□□□□ -1.97
SNRPF-202ENST00000549580 IGHV3-74A0A0B4J1X5 117 aa2.74□□□□□ -1.97
SNRPF-202ENST00000549580 GSTTP1A0A1W2PQM5 241 aa2.74□□□□□ -1.97
SNRPF-202ENST00000549580 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
SNRPF-202ENST00000549580 PINLYPA6NC86 204 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms