RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MAJINQ3KP22 176 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ALG10BQ5I7T1 473 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 AQP11Q8NBQ7 271 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 BBS1Q8NFJ9 593 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR52M1Q8NGK5 317 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 OR1J4Q8NGS1 313 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 EXOSC8Q96B26 276 aaKnown RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 POM121L2Q96KW2 1035 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 JMJD8Q96S16 334 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 CNN2Q99439 309 aaKnown RBP4.25□□□□□ -1.73
SCAF11-212ENST00000549162 ATF6BQ99941 703 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 SYT3Q9BQG1 590 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 BABAM2Q9NXR7 383 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 SLC25A15Q9Y619 301 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 DSCAML1Q8TD84 2053 aa4.25□□□□□ -1.73
SCAF11-212ENST00000549162 PI4KAP42356 2102 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TRAV34A0A0B4J273 112 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 hCG_1809904A0A1W2PP81 198 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1W2PPE2 198 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1W2PR64 198 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 NAP1L6A6NFF2 107 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 C5orf58C9J3I9 102 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CCRL2O00421 344 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ATP6AP2O75787 350 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FADS2O95864 444 aaKnown RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FSHBP01225 129 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TACSTD2P09758 323 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ACSM4P0C7M7 580 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 POLR2IP36954 125 aaKnown RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ARL1P40616 181 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RPS5P46782 204 aaKnown RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HPCAP84074 193 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HSF1Q00613 529 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HBMQ6B0K9 141 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 DGAT2L7PQ6IED9 249 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ACSM5Q6NUN0 579 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PET117Q6UWS5 81 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF813Q6ZN06 617 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SFTPA2Q8IWL1 248 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 GHDCQ8N2G8 530 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF433Q8N7K0 673 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 OR6Q1Q8NGQ2 317 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CAPSLQ8WWF8 208 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 DERL3Q96Q80 235 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 GFI1Q99684 422 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 MS4A7Q9GZW8 240 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CTPS2Q9NRF8 586 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SPRR3Q9UBC9 169 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SLC25A10Q9UBX3 287 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TBC1D24Q9ULP9 559 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 MPC1Q9Y5U8 109 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 LHFPL6Q9Y693 200 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CLCA3PQ9Y6N3 262 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 C4orf47A7E2U8 309 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 OR2C1O95371 312 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TFP02787 698 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 F7P08709 466 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CCL4P13236 92 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF182P17025 639 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 DTYMKP23919 212 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 IL12BP29460 328 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 DLSTP36957 453 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HOXC5Q00444 222 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 MZT1Q08AG7 82 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RSPO4Q2I0M5 234 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 NKAIN2Q5VXU1 208 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 C11orf88Q6PI97 169 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FAM180AQ6UWF9 173 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 KCTD9Q7L273 389 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 MDGA2Q7Z553 956 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM251Q8N6I4 163 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PNPLA1Q8N8W4 532 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TSPAN14Q8NG11 270 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 TEX47Q8TBZ9 253 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 AQP3Q92482 292 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HSD17B8Q92506 261 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SARAFQ96BY9 339 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PLK3Q9H4B4 646 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 B3GAT2Q9NPZ5 323 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 HINT3Q9NQE9 182 aaKnown RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RLIMQ9NVW2 624 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FBXO34Q9NWN3 711 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PDP1Q9P0J1 537 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PLEKHB1Q9UF11 243 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZDHHC8Q9ULC8 765 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FAM215AQ9Y5M1 114 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ORC6Q9Y5N6 252 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CCDC88CQ9P219 2028 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FAM149AA5PLN7 773 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 PATE3B3GLJ2 98 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 DHHO43323 396 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 GMDSO60547 372 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 IGHV3-13P01766 116 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 IGHG1P01857 330 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FUT4P22083 530 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 APLNRP35414 380 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 MDH2P40926 338 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms