RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 FAM122BQ7Z309 247 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 OR5L1Q8NGL2 311 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 RP9Q8TA86 221 aaKnown RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 SLITRK2Q9H156 845 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 UNKLQ9H9P5 680 aaKnown RBP10.79□□□□□ -0.68
PTCH1-218ENST00000548945 MIOXQ9UGB7 285 aa10.79□□□□□ -0.68
PTCH1-218ENST00000548945 A0A087WUU8 490 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 H7C1C5 153 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 FFAR1O14842 300 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 COX4I1P13073 169 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 CD80P33681 288 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 RPL4P36578 427 aaKnown RBP10.78□□□□□ -0.68
PTCH1-218ENST00000548945 LCN6P62502 163 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 SLC9A3R2Q15599 337 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 ZNF181Q2M3W8 571 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 ZBED5Q49AG3 693 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 MESTQ5EB52 335 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 MBOAT2Q6ZWT7 520 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 PARP8Q8N3A8 854 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 OR8G5Q8NG78 346 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 OR13C2Q8NGS9 318 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 OR13G1Q8NGZ3 307 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 UPRTQ96BW1 309 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 RASD2Q96D21 266 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 ZNF570Q96NI8 536 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 DUX5Q96PT3 197 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 SSBP3Q9BWW4 388 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-218ENST00000548945 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 TMEM5Q9Y2B1 443 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 ADAM18Q9Y3Q7 739 aa10.78□□□□□ -0.68
PTCH1-218ENST00000548945 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 CDC42EP2O14613 210 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 PLATP00750 562 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 CTLA4P16410 223 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 FUT4P22083 530 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 SDHAP31040 664 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 SRP9P49458 86 aaKnown RBP10.77□□□□□ -0.69
PTCH1-218ENST00000548945 HNRNPA0Q13151 305 aaKnown RBP10.77□□□□□ -0.69
PTCH1-218ENST00000548945 KCNMB1Q16558 191 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 GPR139Q6DWJ6 353 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF730Q6ZMV8 503 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 ARPINQ7Z6K5 226 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 VTCN1Q7Z7D3 282 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 KLBQ86Z14 1044 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 GLB1L2Q8IW92 636 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 OR1F12Q8NHA8 337 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 RAB40AQ8WXH6 277 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 DACT3Q96B18 629 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-218ENST00000548945 MEGF10Q96KG7 1140 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 Q96M85 177 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 GPX7Q96SL4 187 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-218ENST00000548945 C1QTNF5Q9BXJ0 243 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 NMNAT1Q9HAN9 279 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-218ENST00000548945 TMEM165Q9HC07 324 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 RHCGQ9UBD6 479 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 ASH2LQ9UBL3 628 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 MMP24Q9Y5R2 645 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
PTCH1-218ENST00000548945 A0A1B0GWJ7 208 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 LRRC30A6NM36 301 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 J3KTA2 159 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 KHDRBS3O75525 346 aaKnown RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 IGHV4-38-2P0DP08 117 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 RPS2P15880 293 aaKnown RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 GPR4P46093 362 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 YAP1P46937 504 aaKnown RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 ERFP50548 548 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 BPIFB3P59826 476 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 GNB2P62879 340 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 OCLNQ16625 522 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 CCDC92Q53HC0 331 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 PGM2L1Q6PCE3 622 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 RRM2BQ7LG56 351 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 NLRC3Q7RTR2 1065 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 C1orf87Q8N0U7 546 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 SLC7A6Q92536 515 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 NEIL1Q96FI4 390 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 ZNF582Q96NG8 517 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-218ENST00000548945 SLC30A2Q9BRI3 323 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 PRDM13Q9H4Q3 707 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 NRIP3Q9NQ35 241 aa10.76□□□□□ -0.69
PTCH1-218ENST00000548945 VSX1Q9NZR4 365 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms