RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TIMM50Q3ZCQ8 353 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 KCTD18Q6PI47 426 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-227ENST00000548080 FAM220AQ7Z4H9 259 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 LINC00346Q8IVM7 164 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 ZNF433Q8N7K0 673 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-227ENST00000548080 YIPF7Q8N8F6 280 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 OR8B4Q96RC9 309 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 AMELYQ99218 206 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 OR51E2Q9H255 320 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 CRLF2Q9HC73 371 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 SLCO1C1Q9NYB5 712 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 MALT1Q9UDY8 824 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 KCNN3Q9UGI6 736 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 NDRG3Q9UGV2 375 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 CYB5R1Q9UHQ9 305 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 IKZF2Q9UKS7 526 aa15.2■□□□□ 0.02
HDAC7-227ENST00000548080 ITPR2Q14571 2701 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 HRNRQ86YZ3 2850 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 PNMA8CA0A1B0GUJ8 204 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 A0A1W2PR80 420 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 PSMD9O00233 223 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 KRT33AO76009 404 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 THBDP07204 575 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 OR8G3PP0DMU2 310 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 EPXP11678 715 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 PSMB1P20618 241 aaKnown RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 COX5AP20674 150 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 MSR1P21757 451 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 PSMA1P25786 263 aaKnown RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 LSM6P62312 80 aaKnown RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 ROM1Q03395 351 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 MRPL28Q13084 256 aaKnown RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 DCXRQ7Z4W1 244 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 WFDC8Q8IUA0 241 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 HAVCR2Q8TDQ0 301 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 FAM222BQ8WU58 562 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 RPL3LQ92901 407 aaKnown RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 NELFAQ9H3P2 528 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 GPR35Q9HC97 309 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 ACOXLQ9NUZ1 547 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 POLR1DQ9Y2S0 133 aa15.19■□□□□ 0.02
HDAC7-227ENST00000548080 SIRT4Q9Y6E7 314 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-227ENST00000548080 CIB4A0PJX0 185 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 OGG1O15527 345 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 ABHD16AO95870 558 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 GABRA5P31644 462 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 TGM4P49221 684 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 KRTAP10-9P60411 292 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 LSM3P62310 102 aaKnown RBP15.18■□□□□ 0.02
HDAC7-227ENST00000548080 MRPS34P82930 218 aaKnown RBP15.18■□□□□ 0.02
HDAC7-227ENST00000548080 P2RY6Q15077 328 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 CCDC58Q4VC31 144 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 RPL22L1Q6P5R6 122 aaKnown RBP15.18■□□□□ 0.02
HDAC7-227ENST00000548080 GDPGP1Q6ZNW5 385 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 ZNF679Q8IYX0 411 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 OR2AJ1Q8NGZ0 328 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 OR52N5Q8NH56 324 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 ST7LQ8TDW4 575 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 NABP1Q96AH0 204 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 ZNF837Q96EG3 531 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-227ENST00000548080 ST6GALNAC2Q9UJ37 374 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 SF3B6Q9Y3B4 125 aaKnown RBP15.18■□□□□ 0.02
HDAC7-227ENST00000548080 GRIP1Q9Y3R0 1128 aa15.18■□□□□ 0.02
HDAC7-227ENST00000548080 LOC100506127A0A0U1RQW1 187 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 TRIM64BA6NI03 449 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 RPL36A-HNRNPH2H7BZ11 118 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 SIAH2O43255 324 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 PLPP2O43688 288 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 ATE1O95260 518 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 CD53P19397 219 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 NPR2P20594 1047 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 PSMB10P40306 273 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 CRYBB2P43320 205 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 RPS25P62851 125 aaKnown RBP15.17■□□□□ 0.02
HDAC7-227ENST00000548080 ROR2Q01974 943 aaKnown RBP15.17■□□□□ 0.02
HDAC7-227ENST00000548080 AQP6Q13520 282 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 CEACAM16Q2WEN9 425 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 LIPNQ5VXI9 398 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 DMKNQ6E0U4 476 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-227ENST00000548080 CORO6Q6QEF8 472 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 ARL9Q6T311 187 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 LRRN1Q6UXK5 716 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 KRT77Q7Z794 578 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 TMEM200AQ86VY9 491 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 STEAP2Q8NFT2 490 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 HTRA1Q92743 480 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 DACH2Q96NX9 599 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 MROQ9BYG7 248 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 C1orf198Q9H425 327 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 SIAEQ9HAT2 523 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 ELOVL3Q9HB03 270 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 TMEM38BQ9NVV0 291 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 STUB1Q9UNE7 303 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 LHFPL6Q9Y693 200 aa15.17■□□□□ 0.02
HDAC7-227ENST00000548080 ABCA4P78363 2273 aa15.16■□□□□ 0.02
HDAC7-227ENST00000548080 A6NNC1 897 aa15.16■□□□□ 0.02
HDAC7-227ENST00000548080 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
HDAC7-227ENST00000548080 SLC22A1O15245 554 aa15.16■□□□□ 0.02
HDAC7-227ENST00000548080 GPX5O75715 221 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms