RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 RSRC1Q96IZ7 334 aaKnown RBP17.1■□□□□ 0.33
SSH1-207ENST00000547862 MEGF10Q96KG7 1140 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 C1orf147Q96MC9 270 aaPredicted RBP17.1■□□□□ 0.33
SSH1-207ENST00000547862 WACQ9BTA9 647 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 SSBP3Q9BWW4 388 aaPredicted RBP17.1■□□□□ 0.33
SSH1-207ENST00000547862 GCM1Q9NP62 436 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 SOX21Q9Y651 276 aaPredicted RBP17.1■□□□□ 0.33
SSH1-207ENST00000547862 TRAV40A0A0B4J280 105 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 OR6C6A6NF89 314 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 H0YL77 283 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 TMPRSS2O15393 492 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 IGHV4-38-2P0DP08 117 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 PRTN3P24158 256 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 GSK3BP49841 420 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 DBPQ10586 325 aaPredicted RBP17.09■□□□□ 0.33
SSH1-207ENST00000547862 PTCHD4Q6ZW05 846 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 MOGAT3Q86VF5 341 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 PARP8Q8N3A8 854 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 PTP4A1Q93096 173 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 COG8Q96MW5 612 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 GPA33Q99795 319 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 NMNAT1Q9HAN9 279 aaPredicted RBP17.09■□□□□ 0.33
SSH1-207ENST00000547862 LRCH1Q9Y2L9 728 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 AP3M1Q9Y2T2 418 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 IER3IP1Q9Y5U9 82 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 ENPP4Q9Y6X5 453 aa17.09■□□□□ 0.33
SSH1-207ENST00000547862 MGAM2Q2M2H8 2515 aa17.08■□□□□ 0.33
SSH1-207ENST00000547862 KCNAB3O43448 404 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.32
SSH1-207ENST00000547862 COX4I1P13073 169 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 RAC2P15153 192 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 H2AFXP16104 143 aaPredicted RBP17.08■□□□□ 0.32
SSH1-207ENST00000547862 SELEP16581 610 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 TUBG1P23258 451 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 GNB2P62879 340 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 FAM201AQ5SY85 155 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 CORO6Q6QEF8 472 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 FAM156AQ8NDB6 213 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 OR52E2Q8NGJ4 325 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 SLC7A13Q8TCU3 470 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 TSSK2Q96PF2 358 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 KCTD14Q9BQ13 255 aaPredicted RBP17.08■□□□□ 0.32
SSH1-207ENST00000547862 ZNF747Q9BV97 191 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 NUAK2Q9H093 628 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 TUBG2Q9NRH3 451 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 RPS6KA6Q9UK32 745 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 AURKCQ9UQB9 309 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 SIGLEC7Q9Y286 467 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 V9GYQ6 96 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 MEGF8Q7Z7M0 2845 aa17.08■□□□□ 0.32
SSH1-207ENST00000547862 MDFIC2A0A1B0GVS7 189 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 F5H5P2 479 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 AHCYL1O43865 530 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 DIRAS1O95057 198 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 PPP1R3DO95685 299 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 NUDT2P50583 147 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 LSM6P62312 80 aaKnown RBP17.07■□□□□ 0.32
SSH1-207ENST00000547862 GPR139Q6DWJ6 353 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 BTNL3Q6UXE8 466 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 KLBQ86Z14 1044 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 OR8G5Q8NG78 346 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 OR5L1Q8NGL2 311 aa17.07■□□□□ 0.32
SSH1-207ENST00000547862 UNKLQ9H9P5 680 aaKnown RBP17.07■□□□□ 0.32
SSH1-207ENST00000547862 VSX1Q9NZR4 365 aaPredicted RBP17.07■□□□□ 0.32
SSH1-207ENST00000547862 POLR3KQ9Y2Y1 108 aaPredicted RBP17.07■□□□□ 0.32
SSH1-207ENST00000547862 FAM32AQ9Y421 112 aaKnown RBP17.07■□□□□ 0.32
SSH1-207ENST00000547862 TRBV4-1A0A0J9YWV2 114 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 MLNRO43193 412 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 CD80P33681 288 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 SRP9P49458 86 aaKnown RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 RGS6P49758 472 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 SHISA2Q6UWI4 295 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 TSEN54Q7Z6J9 526 aaKnown RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 ADCK1Q86TW2 530 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 LINC00346Q8IVM7 164 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 OR13G1Q8NGZ3 307 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 OR52J3Q8NH60 311 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 RP9Q8TA86 221 aaKnown RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 FANK1Q8TC84 345 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 SLC25A28Q96A46 364 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 APOBEC3DQ96AK3 386 aaPredicted RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 ZNF582Q96NG8 517 aaPredicted RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 ANKRD19PQ9H560 264 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 ZMAT3Q9HA38 289 aaKnown RBP17.06■□□□□ 0.32
SSH1-207ENST00000547862 NRIP3Q9NQ35 241 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 LHFPL6Q9Y693 200 aa17.06■□□□□ 0.32
SSH1-207ENST00000547862 IGHV2-70DA0A0C4DH43 119 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 UNC119BA6NIH7 251 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 DCTN6O00399 190 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 SLC22A2O15244 555 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 HLA-DPB1P04440 258 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 WNT2P09544 360 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 CDKN2AP42771 156 aaKnown RBP17.05■□□□□ 0.32
SSH1-207ENST00000547862 OMPP47874 163 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 RPS6KA3P51812 740 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 FXYD6P3P58550 94 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 SEC23BQ15437 767 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 SLC27A4Q6P1M0 643 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 LEG1Q6P5S2 330 aa17.05■□□□□ 0.32
SSH1-207ENST00000547862 DNM1P34Q6PK57 102 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms