RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 METTL7AQ9H8H3 244 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 FBXO6Q9NRD1 293 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 PISDQ9UG56 409 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF391Q9UJN7 358 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 CSDC2Q9Y534 153 aaKnown RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 TSSC4Q9Y5U2 329 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-204ENST00000546816 MUC6Q6W4X9 2439 aa1.56□□□□□ -2.16
CCDC38-204ENST00000546816 SDK2Q58EX2 2172 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 TRAV19A0A0A6YYK7 116 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 H0Y8G0 127 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 PPP1R2P9O14990 202 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CDC40O60508 579 aaKnown RBP eCLIP1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CLIC3O95833 236 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 IGHV3-11P01762 117 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 HLA-DQB1P01920 261 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 ERGP11308 486 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF250P15622 560 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 HNRNPH3P31942 346 aaKnown RBP1.55□□□□□ -2.16
CCDC38-204ENST00000546816 NSG1P42857 185 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CSNK1EP49674 416 aaKnown RBP1.55□□□□□ -2.16
CCDC38-204ENST00000546816 SULT1E1P49888 294 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 TAS2R31P59538 309 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CDK5Q00535 292 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 IL15RAQ13261 267 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 SSX2Q16385 188 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 PGGHGQ32M88 737 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 ADNP2Q6IQ32 1131 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 FAM43BQ6ZT52 329 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-204ENST00000546816 COX18Q8N8Q8 333 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 NECAB1Q8N987 351 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 OR1P1Q8NH06 330 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 OR10G6Q8NH81 332 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CCDC126Q96EE4 140 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 COL21A1Q96P44 957 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 IP6K3Q96PC2 410 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 LHX5Q9H2C1 402 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 C8orf17Q9NRJ1 99 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 CTNNA3Q9UI47 895 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 LSM7Q9UK45 103 aaKnown RBP1.55□□□□□ -2.16
CCDC38-204ENST00000546816 STARD10Q9Y365 291 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
CCDC38-204ENST00000546816 IGLV1-36A0A0B4J1U3 117 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM120BA0PK00 339 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 XKRY2A2RUG3 117 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 NUPL2O15504 423 aaKnown RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 EIF1BO60739 113 aaKnown RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 H6PDO95479 791 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 PAHP00439 452 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF806P0C7X5 589 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 CT45A6P0DMU7 189 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 CT45A5P0DMU8 189 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 CT45A7P0DMV0 189 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 LGALS3P17931 250 aaKnown RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ATF6P18850 670 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 NAA10P41227 235 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 EIF1P41567 113 aaKnown RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ATP5IP56385 69 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 PPP1CBP62140 327 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 CT45A1Q5HYN5 189 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 RNASEKQ6P5S7 137 aaKnown RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM107Q6UX40 140 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 NIPA1Q7RTP0 329 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 TTLQ8NG68 377 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 CT45A3Q8NHU0 189 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 KCNG3Q8TAE7 436 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF502Q8TBZ5 544 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 SLC2A14Q8TDB8 520 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 TMEM230Q96A57 120 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 TPD52L3Q96J77 140 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ATP5SQ99766 215 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 PKIBQ9C010 78 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 FGF23Q9GZV9 251 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 RACGAP1Q9H0H5 632 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 FGF20Q9NP95 211 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 SLC2A8Q9NY64 477 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 PSMC3IPQ9P2W1 217 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 UXTQ9UBK9 157 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 LGALS13Q9UHV8 139 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF230Q9UIE0 474 aaPredicted RBP1.54□□□□□ -2.16
CCDC38-204ENST00000546816 HPCAL4Q9UM19 191 aa1.54□□□□□ -2.16
CCDC38-204ENST00000546816 IGHV3-72A0A0B4J1Y9 119 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 IGHV1-3A0A0C4DH29 117 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 A0A1B0GUH1 482 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 FAM47DPA6NHR8 397 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 EIF4E2O60573 245 aaKnown RBP1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TSPAN13O95857 204 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 CYB5R3P00387 301 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-204ENST00000546816 UQCRFS1P1P0C7P4 283 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TGFBR1P36897 503 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 MPV17P39210 176 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 GFERP55789 205 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 RPS11P62280 158 aaKnown RBP eCLIP1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TRIP11Q15643 1979 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 YIF1BQ5BJH7 314 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TEX30Q5JUR7 227 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 ZFAND6Q6FIF0 208 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 SASS6Q6UVJ0 657 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TICRRQ7Z2Z1 1910 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 NANOGNBQ7Z5D8 188 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms