RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 IGHV2OR16-5A0A0B4J2B6 119 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 LOC100130705A0A1B0GUX0 176 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SLC22A31A6NKX4 558 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SHISA9B4DS77 424 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ATP6V1G2-DDX39BF2Z307 99 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SSX4O60224 188 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 MPZL2O60487 215 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 DOK2O60496 412 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SNAP29O95721 258 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SPARCP09486 303 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 CCNOP22674 350 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 APEX1P27695 318 aaKnown RBP11.55□□□□□ -0.56
RAB5B-203ENST00000546810 CFPP27918 469 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SPOCK1Q08629 439 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 APOFQ13790 326 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 RAB35Q15286 201 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 TEX30Q5JUR7 227 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 LINC01590Q5TEZ4 76 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 SHFQ7M4L6 423 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ERI1Q8IV48 349 aaKnown RBP11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF584Q8IVC4 421 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 MBOAT4Q96T53 435 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 HDHD2Q9H0R4 259 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 FAM118AQ9NWS6 357 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
RAB5B-203ENST00000546810 CISD1Q9NZ45 108 aaKnown RBP11.55□□□□□ -0.56
RAB5B-203ENST00000546810 CYB5R1Q9UHQ9 305 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 ATPIF1Q9UII2 106 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 COMMD3-BMI1R4GMX3 469 aa11.55□□□□□ -0.56
RAB5B-203ENST00000546810 C5orf49A4QMS7 147 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 SNTNA6NMZ2 147 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF593O00488 134 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 RER1O15258 196 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 LMX1BO60663 402 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF35P13682 527 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF16P17020 682 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 CALCRP30988 508 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 RAD52P43351 418 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 HTR5AP47898 357 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 FABP6P51161 128 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 EFNB1P98172 346 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 DBPQ10586 325 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ECH1Q13011 328 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 RIPK1Q13546 671 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ELFN2Q5R3F8 820 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 TTC23Q5W5X9 447 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 OTPQ5XKR4 325 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 SLC18B1Q6NT16 456 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF544Q6NX49 715 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 VASH1Q7L8A9 365 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 MYPOPQ86VE0 399 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 LINC00346Q8IVM7 164 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 CPEB3Q8NE35 698 aaKnown RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 NUP37Q8NFH4 326 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 OR6N2Q8NGY6 317 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 OR1F12Q8NHA8 337 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZNRF4Q8WWF5 429 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 IPCEF1Q8WWN9 437 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 RFKQ969G6 155 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 TEAD3Q99594 435 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 PITX2Q99697 317 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 COQ7Q99807 217 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 APOL4Q9BPW4 351 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 DHRS9Q9BPW9 319 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 WDR76Q9H967 626 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-203ENST00000546810 LHFPL6Q9Y693 200 aa11.54□□□□□ -0.56
RAB5B-203ENST00000546810 FREM1Q5H8C1 2179 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 OR6C6A6NF89 314 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 M0R129 80 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 SLC16A6O15403 523 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 SLC2A5P22732 501 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 NR4A1P22736 598 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 APOBEC3AP31941 199 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-203ENST00000546810 HIST1H3AP68431 136 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 TMED1Q13445 227 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 PCK2Q16822 640 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
RAB5B-203ENST00000546810 HIST2H3PS2Q5TEC6 136 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 AADACL4Q5VUY2 407 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 MEDAGQ5VYS4 303 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 CORO6Q6QEF8 472 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 HIST2H3AQ71DI3 136 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 C1orf174Q8IYL3 243 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 DHRSXQ8N5I4 330 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 BBS1Q8NFJ9 593 aa11.53□□□□□ -0.56
RAB5B-203ENST00000546810 NEUROG1Q92886 237 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms