RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	DCD	P81605	110 aa	Known RBP	11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	GUCA2A	Q02747	115 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	POU3F1	Q03052	451 aa	Predicted RBP	11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	ETFDH	Q16134	617 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	C1orf189	Q5VU69	101 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF813	Q6ZN06	617 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	LYPD6	Q86Y78	171 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	SPEM1	Q8N4L4	309 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	DEFB119	Q8N690	84 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	NFAM1	Q8NET5	270 aa	Predicted RBP	11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR5M9	Q8NGP3	310 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR5M8	Q8NGP6	311 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	ATOH1	Q92858	354 aa	Predicted RBP	11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZBTB8A	Q96BR9	441 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	SLAMF6	Q96DU3	332 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	PHB2	Q99623	299 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	B3GNT4	Q9C0J1	378 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	PTGES2	Q9H7Z7	377 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	CENPM	Q9NSP4	180 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	SDHAF2	Q9NX18	166 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	GHRL	Q9UBU3	117 aa		11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	TMA7	Q9Y2S6	64 aa	Known RBP	11.65	□□□□□ -0.55
CPSF7-223	ENST00000544669	KANTR	A0A1W2PQU2	76 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	MFSD2B	A6NFX1	497 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF878	C9JN71	531 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	SDC3	O75056	442 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	GSTP1	P09211	210 aa	Known RBP	11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF20	P17024	532 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	NUP62	P37198	522 aa	Predicted RBP	11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	GUCA1A	P43080	201 aa	Predicted RBP	11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	EMP2	P54851	167 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	SPOCK1	Q08629	439 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	CSRP2	Q16527	193 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF239	Q16600	458 aa	Known RBP	11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF260	Q3ZCT1	412 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	NKAIN1	Q4KMZ8	207 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	RTL6	Q6ICC9	239 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ASPHD2	Q6ICH7	369 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	C3orf33	Q6P1S2	294 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF546	Q86UE3	836 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	SLC25A42	Q86VD7	318 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	HEATR5A	Q86XA9	2040 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	CCDC36	Q8IYA8	594 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	PRSS58	Q8IYP2	241 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	APCDD1L	Q8NCL9	501 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR52B4	Q8NGK2	314 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	IFT46	Q9NQC8	304 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	FAM206A	Q9NX38	181 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669	KLRF1	Q9NZS2	232 aa		11.64	□□□□□ -0.55
CPSF7-223	ENST00000544669		A0A1B0GTI1	187 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	ACSM4	P0C7M7	580 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	GNAL	P38405	381 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CLRN1	P58418	232 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	PLA2G7	Q13093	441 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	TAF13	Q15543	124 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	KCNMB1	Q16558	191 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	PNLIPRP3	Q17RR3	467 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	OVCH2	Q7RTZ1	564 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	LYG2	Q86SG7	212 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	STEAP2	Q8NFT2	490 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR4D10	Q8NGI6	311 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR6X1	Q8NH79	312 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	KCNG3	Q8TAE7	436 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	FGGY	Q96C11	551 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	KLHDC3	Q9BQ90	382 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	PDCD10	Q9BUL8	212 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	MRPL13	Q9BYD1	178 aa	Known RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	PBOV1	Q9GZY1	135 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	NARFL	Q9H6Q4	476 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	RARRES3	Q9UL19	164 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	HDGFL3	Q9Y3E1	203 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669		A0A087WZY1	265 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	TP53I11	O14683	189 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	APOC1	P02654	83 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	NMB	P08949	121 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF735	P0CB33	412 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	BID	P55957	195 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	STARD6	P59095	220 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	GRB2	P62993	217 aa	Known RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CXADR	P78310	365 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CFHR1	Q03591	330 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CDNF	Q49AH0	187 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	ZNF529	Q6P280	563 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	NHLRC1	Q6VVB1	395 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	LANCL3	Q6ZV70	420 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	COX15	Q7KZN9	410 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	KCNRG	Q8N5I3	272 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	C11orf40	Q8WZ69	217 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	OXGR1	Q96P68	337 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CDCP1	Q9H5V8	836 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	WNT16	Q9UBV4	365 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CTSF	Q9UBX1	484 aa		11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	NXT1	Q9UKK6	140 aa	Known RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	NOP16	Q9Y3C1	178 aa	Known RBP	11.63	□□□□□ -0.55
CPSF7-223	ENST00000544669	OR5H14	A6NHG9	310 aa		11.62	□□□□□ -0.55
CPSF7-223	ENST00000544669	RAB27B	O00194	218 aa		11.62	□□□□□ -0.55
CPSF7-223	ENST00000544669	P2RY10	O00398	339 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms