RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 IL20Q9NYY1 176 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 H2AFY2Q9P0M6 372 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ASH2LQ9UBL3 628 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 IL20RAQ9UHF4 553 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 PCDHB10Q9UN67 800 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 B9D1Q9UPM9 204 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 COA3Q9Y2R0 106 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 UGT2A1Q9Y4X1 527 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ORC6Q9Y5N6 252 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TMEM129A0AVI4 362 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 INAFM1C9JVW0 142 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 NDUFS7O75251 213 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 PPP1R3DO95685 299 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ADH4P08319 380 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 TACSTD2P09758 323 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 NAT2P11245 290 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CCL2P13500 99 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SRD5A1P18405 259 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 KITLGP21583 273 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 POU1F1P28069 291 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 HSD11B1P28845 292 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 THBS2P35442 1172 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SRP14P37108 136 aaKnown RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 DDOSTP39656 456 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CDKN2AP42771 156 aaKnown RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CRYBB2P43320 205 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SLC6A9P48067 706 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SLC25A1P53007 311 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 TNFAIP6P98066 277 aaPredicted RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ENDOGQ14249 297 aaKnown RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SEC23BQ15437 767 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CLEC12AQ5QGZ9 265 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 C6orf52Q5T4I8 152 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 LCN1P1Q5VSP4 162 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 C1orf146Q5VVC0 180 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ACSM5Q6NUN0 579 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 RINLQ6ZS11 566 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CCDC121Q6ZUS5 278 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 VASH1Q7L8A9 365 aaPredicted RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 HIPK1Q86Z02 1210 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ZDHHC13Q8IUH4 622 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CIARTQ8N365 385 aaPredicted RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF454Q8N9F8 522 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SPERTQ8NA61 448 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR52E2Q8NGJ4 325 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR6K6Q8NGW6 343 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR11L1Q8NGX0 322 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR4K13Q8NH42 304 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR51F2Q8NH61 342 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SLC25A40Q8TBP6 338 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ST7LQ8TDW4 575 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 SPRYD4Q8WW59 207 aaPredicted RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CCL17Q92583 94 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 HTRA1Q92743 480 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ERGIC1Q969X5 290 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 HAVCR1Q96D42 359 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 MARS2Q96GW9 593 aaKnown RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CLPTM1LQ96KA5 538 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 COPS4Q9BT78 406 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR2J1Q9GZK6 312 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 OR51B6Q9H340 312 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 TPK1Q9H3S4 243 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 NIPAL2Q9H841 368 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ABCB9Q9NP78 766 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 EMC7Q9NPA0 242 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 CMC2Q9NRP2 79 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 TMEM100Q9NV29 134 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 PDP1Q9P0J1 537 aaPredicted RBP4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 DNAJB9Q9UBS3 223 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 IL19Q9UHD0 177 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF391Q9UJN7 358 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 FZR1Q9UM11 496 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 PPP1R3CQ9UQK1 317 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 TMEM14AQ9Y6G1 99 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 U3KQV3 271 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 ARFGEF3Q5TH69 2177 aa4.8□□□□□ -1.64
CLSTN3-215ENST00000544584 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 LOC100509620A0A075B734 347 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 TRAV20A0A0B4J274 112 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 ISPDA4D126 451 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 SNTNA6NMZ2 147 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 VWC2LB2RUY7 222 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF878C9JN71 531 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 PRR23D1E9PI22 279 aaPredicted RBP4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 F5H5K5 113 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 M0R135 149 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 RER1O15258 196 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 KCNAB3O43448 404 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 XRCC2O43543 280 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 SPRY3O43610 288 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 GMDSO60547 372 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 UBOX5O94941 541 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 CLPTM1O96005 669 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 GASTP01350 101 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 LCATP04180 440 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 CD55P08174 381 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 FAM157CP0CG43 387 aa4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 PRR23D2P0DMB1 279 aaPredicted RBP4.79□□□□□ -1.64
CLSTN3-215ENST00000544584 IGHV4-31P0DP07 118 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms