RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MRPL22Q9NWU5 206 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DCAF16Q9NXF7 216 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 FAM53CQ9NYF3 392 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 IL20Q9NYY1 176 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CYB5R1Q9UHQ9 305 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZDHHC8Q9ULC8 765 aa11.1□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TNFRSF11BO00300 401 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 IGHV2-5P01817 119 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MSMBP08118 114 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HNF1AP20823 631 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MXRA7P84157 204 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PPP1R8Q12972 351 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HLXQ14774 488 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 HFEQ30201 348 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 SLC18B1Q6NT16 456 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DNM1P34Q6PK57 102 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 COLCA1Q6ZS62 124 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 OR8D4Q8NGM9 314 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 TMEM158Q8WZ71 300 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CCL17Q92583 94 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 DIRC2Q96SL1 478 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 MAGIXQ9H6Y5 334 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 ZNF665Q9H7R5 613 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 RPRD1BQ9NQG5 326 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 G6PC2Q9NQR9 355 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CDH10Q9Y6N8 788 aa11.09□□□□□ -0.63
TNFRSF1A-215ENST00000543359 CLDN25C9JDP6 229 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 J3QW42 95 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TIMM8AO60220 97 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RAC2P15153 192 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 GSTM3P21266 225 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CALB2P22676 271 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC35F1Q5T1Q4 408 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CFAP77Q6ZQR2 320 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RASSF6Q6ZTQ3 369 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 GLCCI1Q86VQ1 547 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 JAZF1Q86VZ6 243 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 DHFR2Q86XF0 187 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LINC00471Q8N535 108 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CCDC197Q8NCU1 140 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SDR9C7Q8NEX9 313 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR52E2Q8NGJ4 325 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CLPTM1LQ96KA5 538 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 EGLN1Q9GZT9 426 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 HDHD2Q9H0R4 259 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 FN3KQ9H479 309 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LPAR2Q9HBW0 351 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TAS2R1Q9NYW7 299 aa11.08□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ACOT8O14734 319 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PLPP2O43688 288 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RENP00797 406 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 AVPP01185 164 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PSKH1P11801 424 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CENPAP49450 140 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RGS6P49758 472 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZMAT1Q5H9K5 638 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ACSM5Q6NUN0 579 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 NAA40Q86UY6 237 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LINC00346Q8IVM7 164 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LNX2Q8N448 690 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZNF283Q8N7M2 679 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CYB561A3Q8NBI2 242 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR51F2Q8NH61 342 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RAB1CQ92928 201 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 APOBEC3DQ96AK3 386 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MAP6Q96JE9 813 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 COG8Q96MW5 612 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SIGLEC11Q96RL6 698 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 C1QTNF5Q9BXJ0 243 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 C1orf21Q9H246 121 aa11.07□□□□□ -0.64
TNFRSF1A-215ENST00000543359 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CCNB2O95067 398 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 IGHV2-70P01814 119 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PCMT1P22061 227 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 NOS3P29474 1203 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PYCR1P32322 319 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MICAQ29983 383 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2T5Q6IEZ7 315 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2T2Q6IF00 324 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RPL13AP3Q6NVV1 102 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 AQP11Q8NBQ7 271 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC37A3Q8NCC5 494 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2Z1Q8NG97 314 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms