RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 IGHV1-2P23083 117 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 OTX1P32242 354 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 TIMP3P35625 211 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 MAGEB1P43366 347 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 MMP16P51512 607 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 PSMA6P60900 246 aaKnown RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 PSG4Q00888 419 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 KRTAP27-1Q3LI81 207 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 ACSM3Q53FZ2 586 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 ZNF774Q6NX45 483 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 SLC16A14Q7RTX9 510 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 ABHD12BQ7Z5M8 362 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 CEACAM19Q7Z692 300 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 SYT9Q86SS6 491 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 RDH10Q8IZV5 341 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 MS4A15Q8N5U1 240 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 AKR7LQ8NHP1 331 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 KCTD7Q96MP8 289 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 KCNJ15Q99712 375 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 TP63Q9H3D4 680 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 NIPAL2Q9H841 368 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 PLSCR4Q9NRQ2 329 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 SLC5A6Q9Y289 635 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 ATMQ13315 3056 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 PIEZO2Q9H5I5 2752 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 TMEM269A0A1B0GVZ9 245 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 PRRG2O14669 202 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 PIN1P1O15428 100 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 SGCEO43556 437 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 DOK2O60496 412 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 FARS2O95363 451 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 TTRP02766 147 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 EDN3P14138 238 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 COX5AP20674 150 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 HSD11B1P28845 292 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 RPS19P39019 145 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 CX3CR1P49238 355 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 PRKXP51817 358 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ZNF121P58317 390 aaPredicted RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 PCBD1P61457 104 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 GRB2P62993 217 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 SCRN3Q0VDG4 424 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 TAF13Q15543 124 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ODF4Q2M2E3 257 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 YIF1BQ5BJH7 314 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ZMAT1Q5H9K5 638 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 Q6ZT83 130 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 PRSS45Q7RTY3 260 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ZNF676Q8N7Q3 588 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ZFP3Q96NJ6 502 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 DACH2Q96NX9 599 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 OR14A2Q96R54 314 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 ATF6BQ99941 703 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 WACQ9BTA9 647 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 SLIRPQ9GZT3 109 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 HDHD2Q9H0R4 259 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 OPN3Q9H1Y3 402 aaPredicted RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 GALNT8Q9NY28 637 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 PLEK2Q9NYT0 353 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 CCDC59Q9P031 241 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 NUFIP1Q9UHK0 495 aaKnown RBP11.59□□□□□ -0.55
CHFR-221ENST00000542714 TINAGQ9UJW2 476 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 GTF2A1LQ9UNN4 478 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 TIMM10BQ9Y5J6 103 aa11.59□□□□□ -0.55
CHFR-221ENST00000542714 SPENQ96T58 3664 aaKnown RBP11.58□□□□□ -0.55
CHFR-221ENST00000542714 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
CHFR-221ENST00000542714 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 ACOD1A6NK06 481 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 TTLL8A6PVC2 850 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 ZNF879B4DU55 563 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 E9PLN8 166 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 CDRT1O95170 752 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 CNOT4O95628 575 aaKnown RBP11.58□□□□□ -0.56
CHFR-221ENST00000542714 SERPINA3P01011 423 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 HLA-HP01893 362 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 DBHP09172 617 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 UCHL1P09936 223 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 SFTPCP11686 197 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 SDC2P34741 201 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 PER3P56645 1201 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 TUBA1BP68363 451 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 HGFACQ04756 655 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 LSAMPQ13449 338 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 EIF2S3LQ2VIR3 472 aaKnown RBP11.58□□□□□ -0.56
CHFR-221ENST00000542714 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 PABPC1L2AQ5JQF8 200 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 BCL2L15Q5TBC7 163 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 ANKRD16Q6P6B7 361 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 TUBA1AQ71U36 451 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 NAA40Q86UY6 237 aa11.58□□□□□ -0.56
CHFR-221ENST00000542714 ELMOD2Q8IZ81 293 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms