RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 BSNQ9UPA5 3926 aa3.87□□□□□ -1.79
MDM2-228ENST00000542502 UTP20O75691 2785 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 MED12LQ86YW9 2145 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 A0A0J9YW62 118 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 A0A1W2PNV4 684 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TCRBV3S1A0A5B6 114 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CPSF4LA6NMK7 179 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 PTGES3LE9PB15 166 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TNFSF11O14788 317 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 BUB3O43684 328 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 IDH3BO43837 385 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CXCL13O43927 109 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 GMFGO60234 142 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 FKBP6O75344 327 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 MRPL33O75394 65 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 PDE5AO76074 875 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 OR2C1O95371 312 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CLDN14O95500 239 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CST1P01037 141 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 LDLRP01130 860 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 C1QCP02747 245 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PRB1P04280 392 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SAGP10523 405 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 PRG2P13727 222 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 NQO1P15559 274 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 NCK1P16333 377 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ZNF43P17038 809 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 FASP25445 335 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 HTR2AP28223 471 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 DCTDP32321 178 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 GUCA1AP43080 201 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 OR1E2P47887 323 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 AMTP48728 403 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 DAP3P51398 398 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 CRYBA2P53672 197 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SH3BGRP55822 239 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 CLDN20P56880 219 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ACTR3P61158 418 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TUBA1BP68363 451 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SORDQ00796 357 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PRKCDQ05655 676 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PUDPQ08623 228 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ZP4Q12836 540 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PMS2P3Q13401 168 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 C1DQ13901 141 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 PON3Q15166 354 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TOMM34Q15785 309 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 STK11Q15831 433 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 C3AR1Q16581 482 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CTU2Q2VPK5 515 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 NDUFAF6Q330K2 333 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 FBXL19-AS1Q494R0 122 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PRR30Q53SZ7 412 aaPredicted RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 FGD3Q5JSP0 725 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TMPRSS11FQ6ZWK6 438 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 NANOGNBQ7Z5D8 188 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 VTCN1Q7Z7D3 282 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 GALNT5Q7Z7M9 940 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 OAFQ86UD1 273 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 NOXA1Q86UR1 476 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 P2RY8Q86VZ1 359 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 HIPK1Q86Z02 1210 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CHERPQ8IWX8 916 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 CCDC36Q8IYA8 594 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SVOPLQ8N434 492 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ATP6V1C2Q8NEY4 427 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 GJC3Q8NFK1 279 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 OR5J2Q8NH18 312 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 RNF128Q8TEB7 428 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SSC4DQ8WTU2 575 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SNAPC3Q92966 411 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 BPIFA2Q96DR5 249 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SGTBQ96EQ0 304 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ADGRG7Q96K78 797 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 C7orf34Q96L11 122 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 LRR1Q96L50 414 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 OXGR1Q96P68 337 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SEPHS2Q99611 448 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 NUDT16L1Q9BRJ7 211 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 CHID1Q9BWS9 393 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 PRRG3Q9BZD7 231 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 OR10A4Q9H209 315 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 NGBQ9NPG2 151 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 B3GAT2Q9NPZ5 323 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 CLCF1Q9UBD9 225 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 SLC7A8Q9UHI5 535 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TINAGQ9UJW2 476 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 MGAT4BQ9UQ53 548 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 AURKCQ9UQB9 309 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 LSM4Q9Y4Z0 139 aaKnown RBP3.86□□□□□ -1.79
MDM2-228ENST00000542502 AP4S1Q9Y587 144 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 ORC6Q9Y5N6 252 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 LIPGQ9Y5X9 500 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 A3GALT2U3KPV4 340 aa3.86□□□□□ -1.79
MDM2-228ENST00000542502 TACC2O95359 2948 aa3.85□□□□□ -1.79
MDM2-228ENST00000542502 NCOA6Q14686 2063 aaPredicted RBP3.85□□□□□ -1.79
MDM2-228ENST00000542502 MED12Q93074 2177 aa3.85□□□□□ -1.79
MDM2-228ENST00000542502 CACNA1CQ13936 2221 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms