RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 FUT1P19526 365 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 FSTP19883 344 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 MAOAP21397 527 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 SDHAP31040 664 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 DLSTP36957 453 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 ADH7P40394 386 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 CAPZBP47756 277 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 H2BFSP57053 126 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 AIMP2Q13155 320 aaKnown RBP9.35□□□□□ -0.91
CHFR-219ENST00000541341 ARL6IP1Q15041 203 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 FHL5Q5TD97 284 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 NUP210LQ5VU65 1888 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 JMJD6Q6NYC1 403 aaPredicted RBP9.35□□□□□ -0.91
CHFR-219ENST00000541341 TMEM71Q6P5X7 295 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 RPTNQ6XPR3 784 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 THSD4Q6ZMP0 1018 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 C17orf107Q6ZR85 190 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 MAMDC2Q7Z304 686 aaPredicted RBP9.35□□□□□ -0.91
CHFR-219ENST00000541341 LRRTM1Q86UE6 522 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 C2orf73Q8N5S3 287 aaPredicted RBP9.35□□□□□ -0.91
CHFR-219ENST00000541341 C15orf54Q8N8G6 183 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 BMPERQ8N8U9 685 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 DTX3Q8N9I9 347 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 NPEPL1Q8NDH3 523 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 SLC30A7Q8NEW0 376 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 BPIFCQ8NFQ6 507 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 OR5M1Q8NGP8 315 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 OR6K6Q8NGW6 343 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 OR4K13Q8NH42 304 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 FLVCR1-AS1Q8TAF5 88 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 LCN9Q8WX39 176 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 MCHR2Q969V1 340 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 TM4SF19Q96DZ7 209 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 ABHD17AQ96GS6 310 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 VRK1Q99986 396 aaPredicted RBP9.35□□□□□ -0.91
CHFR-219ENST00000541341 NMES1Q9C002 83 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 CDCP1Q9H5V8 836 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 Q9N2J8 555 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 C20orf141Q9NUB4 165 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 DNAJB11Q9UBS4 358 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 PILRAQ9UKJ1 303 aa9.35□□□□□ -0.91
CHFR-219ENST00000541341 TRAV18A0A075B6X5 111 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 PIN1P1O15428 100 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 STK17BO94768 372 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 CD37P11049 281 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 ZNF28P17035 718 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 S100PP25815 95 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PSMB5P28074 263 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PEBP1P30086 187 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 GABRA3P34903 492 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PMELP40967 661 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 ECI1P42126 302 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 SLC6A8P48029 635 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 AKR1D1P51857 326 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 GFERP55789 205 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 RPS4XP62701 263 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 PPIAP62937 165 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 ERVK-25P63136 954 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 ERV3-1Q14264 604 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 INPP5JQ15735 1006 aaPredicted RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 SFRP5Q5T4F7 317 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PRAMEF17Q5VTA0 474 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 WBP2NLQ6ICG8 309 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 WDR74Q6RFH5 385 aaPredicted RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 C5orf46Q6UWT4 87 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 OR2W3Q7Z3T1 314 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 LYG2Q86SG7 212 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 OOSP2Q86WS3 158 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 MEX3DQ86XN8 651 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 ZNF584Q8IVC4 421 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 BAP18Q8IXM2 172 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 CARFQ8N187 725 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 CYB561A3Q8NBI2 242 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 SDR9C7Q8NEX9 313 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 OR51S1Q8NGJ8 323 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 OR1J2Q8NGS2 313 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 OR10G6Q8NH81 332 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 FAM3DQ96BQ1 224 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PEX11GQ96HA9 241 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 PDCD1LG2Q9BQ51 273 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 DDA1Q9BW61 102 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 POFUT1Q9H488 388 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 EXOSC3Q9NQT5 275 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 TMEM100Q9NV29 134 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 MRPL15Q9P015 296 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 SEMA5BQ9P283 1151 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 GRHPRQ9UBQ7 328 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 TP53TG5Q9Y2B4 290 aa9.34□□□□□ -0.91
CHFR-219ENST00000541341 HIF3AQ9Y2N7 669 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms