RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 GDPD1Q8N9F7 314 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 OR5AK2Q8NH90 309 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 SETD6Q8TBK2 473 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 RPS4Y2Q8TD47 263 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 GPR148Q8TDV2 347 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 FAM222BQ8WU58 562 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 THEM6Q8WUY1 208 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 CPNE4Q96A23 557 aaPredicted RBP7.38□□□□□ -1.23
CHD4-208ENST00000540960 PELI1Q96FA3 418 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ARL5BQ96KC2 179 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 OR8B4Q96RC9 309 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 HDHD5Q9BXW7 423 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 RERGLQ9H628 205 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 MOB1AQ9H8S9 216 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ISG20L2Q9H9L3 353 aaKnown RBP7.38□□□□□ -1.23
CHD4-208ENST00000540960 PARPBPQ9NWS1 579 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 EMC3Q9P0I2 261 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ABRACLQ9P1F3 81 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 KLHL13Q9P2N7 655 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 CDC42EP3Q9UKI2 254 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 HEATR5AQ86XA9 2040 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 DSCAMO60469 2012 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 A0A0G2JNJ9 132 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 NOTOA8MTQ0 251 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ZIC3O60481 467 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 TRAPPC6AO75865 159 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 AKR7A3O95154 331 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SYNGR4O95473 234 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 TFP02787 698 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 HPNP05981 417 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ADRA2AP08913 450 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SPARCP09486 303 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 UCHL1P09936 223 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 NPR2P20594 1047 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 GDF1P27539 372 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SFTPDP35247 375 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 CD96P40200 585 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 CSNK1A1P48729 337 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 BIDP55957 195 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 LSM6P62312 80 aaKnown RBP7.37□□□□□ -1.23
CHD4-208ENST00000540960 H3F3AP84243 136 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 PITPNAQ00169 270 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 HNRNPA0Q13151 305 aaKnown RBP7.37□□□□□ -1.23
CHD4-208ENST00000540960 TNK1Q13470 666 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SLC17A1Q14916 467 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SF3B4Q15427 424 aaKnown RBP eCLIP7.37□□□□□ -1.239e-8■■■■□ 20.4
CHD4-208ENST00000540960 OR1C1Q15619 314 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 FAM189A2Q15884 450 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 Q499Y3 187 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 GXYLT1Q4G148 440 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 TP53I3Q53FA7 332 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ZMAT1Q5H9K5 638 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ZNF684Q5T5D7 378 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 TMEM244Q5VVB8 128 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 HACD4Q5VWC8 232 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 LIPNQ5VXI9 398 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 BICRALQ6AI39 1079 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 HBMQ6B0K9 141 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 VASNQ6EMK4 673 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SLC25A25Q6KCM7 469 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 CHMP1BQ7LBR1 199 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
CHD4-208ENST00000540960 ZNF676Q8N7Q3 588 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ZNF511Q8NB15 262 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SYT14Q8NB59 555 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 NOXO1Q8NFA2 376 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 SLC26A10Q8NG04 563 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 OR51L1Q8NGJ5 315 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 OR52N5Q8NH56 324 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 OR2V1Q8NHB1 315 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 GNRHR2Q96P88 292 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 MRPL13Q9BYD1 178 aaKnown RBP7.37□□□□□ -1.23
CHD4-208ENST00000540960 C1orf198Q9H425 327 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 NEK6Q9HC98 313 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 TBCCD1Q9NVR7 557 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 ANKRD10Q9NXR5 420 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 Q9UFV3 132 aa7.37□□□□□ -1.23
CHD4-208ENST00000540960 FABP12A6NFH5 140 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 SLC43A1O75387 559 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 UPK1BO75841 260 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 SC5DO75845 299 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 PLGP00747 810 aaPredicted RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 SP1P08047 785 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 H2BFMP0C1H6 154 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 UBCP0CG48 685 aaKnown RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 RAB3BP20337 219 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 NR4A2P43354 598 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 PCBD1P61457 104 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 PLGLB1Q02325 96 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 SCN1BQ07699 218 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 ECH1Q13011 328 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 EIF2B1Q14232 305 aaKnown RBP7.36□□□□□ -1.23
CHD4-208ENST00000540960 TAF13Q15543 124 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 TRIM16LQ309B1 348 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 RIPPLY2Q5TAB7 128 aa7.36□□□□□ -1.23
CHD4-208ENST00000540960 SPINK14Q6IE38 97 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms