RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ZP2Q05996 745 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PRDX1Q06830 199 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PRAMEF9Q5VWM5 478 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PAQR6Q6TCH4 344 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 RBP7Q96R05 134 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 LRFN3Q9BTN0 628 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 G6PC3Q9BUM1 346 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 IKZF5Q9H5V7 419 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TUBA4BQ9H853 241 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ENTPD2Q9Y5L3 495 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PIKFYVEQ9Y2I7 2098 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 VSTM2BA6NLU5 285 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TRDCB7Z8K6 153 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MFNGO00587 321 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PLGP00747 810 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CSTAP01040 98 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 IGF2P01344 180 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SLC35G6P0C7Q6 338 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PSMB6P28072 239 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 AKT2P31751 481 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF836Q6ZNA1 936 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MEPCEQ7L2J0 689 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF547Q8IVP9 402 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CMTM1Q8IZ96 169 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 OR5L2Q8NGL0 311 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 IL22RA2Q969J5 263 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 RERGQ96A58 199 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 HIST1H2AAQ96QV6 131 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TXNDC17Q9BRA2 123 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MTHFD2LQ9H903 347 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SRA1Q9HD15 236 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 NOTCH4Q99466 2003 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3EA0A087X179 549 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3KA0A087X1G2 549 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3FA6NER0 549 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 DEDDO75618 318 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CD37P11049 281 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 BCKDHBP21953 392 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SELENOPP49908 381 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ASCL1P50553 236 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 HMGA2P52926 109 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MRPS34P82930 218 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 KIR2DS3Q14952 304 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MSMO1Q15800 293 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 Q5BKY6 102 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SLC25A30Q5SVS4 291 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TBC1D3GQ6DHY5 549 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 DEGS2Q6QHC5 323 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 DPPA3Q6W0C5 159 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ESPNLQ6ZVH7 1005 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 OR5M1Q8NGP8 315 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 OR14L1PQ8NHC6 308 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 NUBPLQ8TB37 319 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SLC17A9Q9BYT1 436 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 KCNS2Q9ULS6 477 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CSAG2Q9Y5P2 127 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 XKRY2A2RUG3 117 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 A6NIZ1 184 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 TP53I11O14683 189 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 EIF4EP06730 217 aaKnown RBP5.51□□□□□ -1.53
PTPRD-214ENST00000540109 GNSP15586 552 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 DTYMKP23919 212 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 PSMB10P40306 273 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 POU3F4P49335 361 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 RAP1BP61224 184 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 PAFAH1B2P68402 229 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 COL9A2Q14055 689 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-214ENST00000540109 CEBPEQ15744 281 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 DRAM2Q6UX65 266 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 CPOQ8IVL8 374 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 OR2AK2Q8NG84 335 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 TVP23CQ96ET8 276 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 NICN1Q9BSH3 213 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 SRMSQ9H3Y6 488 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 CBLN4Q9NTU7 201 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 KLHL13Q9P2N7 655 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 PISDQ9UG56 409 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 TAC3Q9UHF0 121 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 RALYQ9UKM9 306 aaKnown RBP5.51□□□□□ -1.53
PTPRD-214ENST00000540109 OR5H14A6NHG9 310 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 M0QYG6 137 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 DSCR3O14972 297 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 CD82P27701 267 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 GSK3AP49840 483 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF528Q3MIS6 628 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 OR4C11Q6IEV9 310 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM107Q6UX40 140 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 SLC16A14Q7RTX9 510 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 METTL27Q8N6F8 245 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-214ENST00000540109 OR13C5Q8NGS8 318 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 IFI44Q8TCB0 444 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM37Q8WXS4 190 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 WDR92Q96MX6 357 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 KATNB1Q9BVA0 655 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 BCL2L10Q9HD36 194 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 CENPMQ9NSP4 180 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 RASL12Q9NYN1 266 aa5.51□□□□□ -1.53
PTPRD-214ENST00000540109 OR5AC2Q9NZP5 309 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms