RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SYNGR3O43761 229 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ZNF19P17023 458 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ACTA2P62736 377 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ACTG2P63267 376 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 RAB39AQ14964 217 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 PLEKHG7Q6ZR37 379 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 RHOUQ7L0Q8 258 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ZNF584Q8IVC4 421 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SYS1Q8N2H4 156 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SVOPQ8N4V2 548 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 OR52N1Q8NH53 320 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 OR5M11Q96RB7 305 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 C1QTNF6Q9BXI9 259 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 MROQ9BYG7 248 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 HDHD2Q9H0R4 259 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 OR10A4Q9H209 315 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ELOVL3Q9HB03 270 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 DDX28Q9NUL7 540 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 GNG8Q9UK08 70 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 LSM2Q9Y333 95 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 LRP12Q9Y561 859 aa16.46■□□□□ 0.23
TNFRSF1A-213ENST00000540022 OR6C6A6NF89 314 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 METTL15A6NJ78 407 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 KRT8P05787 483 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 LCKP06239 509 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 H2BFMP0C1H6 154 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 RSPO1Q2MKA7 263 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 DEGS2Q6QHC5 323 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 TMPRSS11AQ6ZMR5 421 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 KCTD8Q6ZWB6 473 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ALDH16A1Q8IZ83 802 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 OR1F12Q8NHA8 337 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 GATAD2BQ8WXI9 593 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SLC7A6Q92536 515 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MRPL48Q96GC5 212 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MS4A3Q96HJ5 214 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ATF6BQ99941 703 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 USB1Q9BQ65 265 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MND1Q9BWT6 205 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ACOXLQ9NUZ1 547 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 FBXL3Q9UKT7 428 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SULT1C4O75897 302 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 CBR1P16152 277 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 APEX1P27695 318 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 HTR5AP47898 357 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 WNT4P56705 351 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SNTB1Q13884 538 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 PPA1Q15181 289 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 LIPNQ5VXI9 398 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ZNF787Q6DD87 383 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 XAF1Q6GPH4 301 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 KCTD20Q7Z5Y7 419 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 YIPF7Q8N8F6 280 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 HSD17B8Q92506 261 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 PELI1Q96FA3 418 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 LRRC46Q96FV0 321 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 COQ7Q99807 217 aa16.45■□□□□ 0.22
TNFRSF1A-213ENST00000540022 C19orf84I3L1E1 186 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ZNF254O75437 659 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 LALBAP00709 142 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 IGKV3-15P01624 115 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MT-ND5P03915 603 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SERPINA5P05154 406 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 CELA3BP08861 270 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 DBHP09172 617 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ZNF14P17017 642 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 CRYGSP22914 178 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 IDH3GP51553 393 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 RIDAP52758 137 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 PLP2Q04941 152 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SPHARQ15513 63 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MED22Q15528 200 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 TAF13Q15543 124 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ALKBH2Q6NS38 261 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SEZ6L2Q6UXD5 910 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MYPOPQ86VE0 399 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 RNF166Q96A37 237 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MUCL1Q96DR8 90 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 MYCBPQ99417 103 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 GRIP1Q9Y3R0 1128 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ADGRG4Q8IZF6 3080 aa16.44■□□□□ 0.22
TNFRSF1A-213ENST00000540022 LOC100509620A0A075B734 347 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 IQCMA0A1B0GVH7 501 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 E9PI62 339 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 RPP14O95059 124 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 THBDP07204 575 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 COX5BP10606 129 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 OTX1P32242 354 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 PSMB10P40306 273 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 PRKXP51817 358 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 GRB2P62993 217 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 SORDQ00796 357 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 GALK2Q01415 458 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 ECH1Q13011 328 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 FAM220AQ7Z4H9 259 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 KLBQ86Z14 1044 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 EGFL6Q8IUX8 553 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 WFIKKN1Q96NZ8 548 aa16.43■□□□□ 0.22
TNFRSF1A-213ENST00000540022 KCNJ15Q99712 375 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms