RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 RSPRY1Q96DX4 576 aa11.21□□□□□ -0.61
USP3-203ENST00000538686 ACY3Q96HD9 319 aa11.21□□□□□ -0.61
USP3-203ENST00000538686 PDE7BQ9NP56 450 aa11.21□□□□□ -0.61
USP3-203ENST00000538686 SIDT1Q9NXL6 827 aaKnown RBP11.21□□□□□ -0.61
USP3-203ENST00000538686 PIN4Q9Y237 131 aaKnown RBP11.21□□□□□ -0.61
USP3-203ENST00000538686 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 PTGESO14684 152 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 B4GALT2O60909 372 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 IGLV3-27P01718 113 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 IRF2P14316 349 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 ADRA2CP18825 462 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 LMO1P25800 156 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 RPL4P36578 427 aaKnown RBP11.21□□□□□ -0.62
USP3-203ENST00000538686 RPL29P47914 159 aaKnown RBP11.21□□□□□ -0.62
USP3-203ENST00000538686 GABRA4P48169 554 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 CSNK1DP48730 415 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 SPOCK1Q08629 439 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 EFEMP1Q12805 493 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 PHF19Q5T6S3 580 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 LEG1Q6P5S2 330 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 ZNF584Q8IVC4 421 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 TVP23CQ96ET8 276 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 SLC6A7Q99884 636 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 PCGF1Q9BSM1 259 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 RNF39Q9H2S5 420 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 SERINC1Q9NRX5 453 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 GRHPRQ9UBQ7 328 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 MSRAQ9UJ68 235 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 ICAM5Q9UMF0 924 aa11.21□□□□□ -0.62
USP3-203ENST00000538686 TRBV11-1A0A0K0K1C0 115 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 H3BNC9 293 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 RAMP1O60894 148 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 LASP1Q14847 261 aaKnown RBP11.2□□□□□ -0.62
USP3-203ENST00000538686 ATP6V1FQ16864 119 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 FAM129CQ86XR2 697 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 OR8G5Q8NG78 346 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 STT3BQ8TCJ2 826 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 TMEM255BQ8WV15 326 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 SUSD6Q92537 303 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 MCHR1Q99705 422 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 Q9N2J8 555 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 OR5AC2Q9NZP5 309 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 PLXNB3Q9ULL4 1909 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 IGLV3-16A0A075B6K0 115 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 TRBV24-1A0A075B6N3 115 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 CCDC163A0A0D9SF12 145 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 TRBV5-5A0A0J9YX44 114 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 DHRS7CA6NNS2 312 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ZNF727A8MUV8 499 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 PEX12O00623 359 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 NME2P1O60361 137 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 TBX6O95947 436 aaPredicted RBP11.2□□□□□ -0.62
USP3-203ENST00000538686 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
USP3-203ENST00000538686 TACSTD2P09758 323 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 OR10J1P30954 320 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 BMI1P35226 326 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 PDLIM4P50479 330 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 RND2P52198 227 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ENPP2Q13822 863 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
USP3-203ENST00000538686 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
USP3-203ENST00000538686 MDGA2Q7Z553 956 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 AMER3Q8N944 861 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ZNF563Q8TA94 476 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 C2orf50Q96LR7 162 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 CDH20Q9HBT6 801 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 KCNK6Q9Y257 313 aa11.2□□□□□ -0.62
USP3-203ENST00000538686 BORCS7-ASMTA0A0B4J1R7 106 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 DOK2O60496 412 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 ALOX12BO75342 701 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 STK17BO94768 372 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 SLCO2B1O94956 709 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 ZFPL1O95159 310 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
USP3-203ENST00000538686 SLC35G6P0C7Q6 338 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 PBX2P40425 430 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 MMP16P51512 607 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
USP3-203ENST00000538686 SLC37A1P57057 533 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 FXYD6P3P58550 94 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 RAB11BQ15907 218 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 ALG10BQ5I7T1 473 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 METRNLQ641Q3 311 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 SZRD1Q7Z422 152 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 CACUL1Q86Y37 369 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 FAM185AQ8N0U4 392 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
USP3-203ENST00000538686 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 G6PC3Q9BUM1 346 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 SGPP1Q9BX95 441 aa11.19□□□□□ -0.62
USP3-203ENST00000538686 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms