RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF222Q9UK12 451 aa8.24□□□□□ -1.09
DDB1-211ENST00000538280 OR52A1Q9UKL2 312 aa8.24□□□□□ -1.09
DDB1-211ENST00000538280 ELF5Q9UKW6 265 aaPredicted RBP8.24□□□□□ -1.09
DDB1-211ENST00000538280 HHLA2Q9UM44 414 aa8.24□□□□□ -1.09
DDB1-211ENST00000538280 FLVCR2Q9UPI3 526 aa8.24□□□□□ -1.09
DDB1-211ENST00000538280 RPH3AQ9Y2J0 694 aaPredicted RBP8.24□□□□□ -1.09
DDB1-211ENST00000538280 HSPB11Q9Y547 144 aa8.24□□□□□ -1.09
DDB1-211ENST00000538280 A0A0A6YYH2 397 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 LOC102725191A0A1B0GVB3 256 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 LOC107986453A0A1B0GWG9 222 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 A6NJ64 397 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 PYCARD-AS1I3L0S3 204 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ERVH48-1M5A8F1 160 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 NTN3O00634 580 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 ARPC1BO15143 372 aaKnown RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 TRAF3IP2O43734 574 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 RBBP9O75884 186 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 CD2P06729 351 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 CSF1P09603 554 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 UBCP0CG48 685 aaKnown RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 PLA2G2AP14555 144 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ADH6P28332 368 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 FAUP35544 74 aaKnown RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 VEGFCP49767 419 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 CAPZA1P52907 286 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 POU3F1Q03052 451 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 RIPPLY1Q0D2K3 151 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 KCNMB1Q16558 191 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF626Q68DY1 528 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 SLC25A47Q6Q0C1 308 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 NLRC3Q7RTR2 1065 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 SLC36A1Q7Z2H8 476 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 DCXRQ7Z4W1 244 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 KDM8Q8N371 416 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 BEST4Q8NFU0 473 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 OR10G3Q8NGC4 313 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 OR10S1Q8NGN2 331 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 GPX8Q8TED1 209 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF431Q8TF32 576 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 THAP3Q8WTV1 239 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 C11orf40Q8WZ69 217 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 SPACA9Q96E40 222 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 SLC25A44Q96H78 314 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 SORCS2Q96PQ0 1159 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 RASL10BQ96S79 203 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 CRB3Q9BUF7 120 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF436Q9C0F3 470 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 OR10A4Q9H209 315 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 SCPEP1Q9HB40 452 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 NOX3Q9HBY0 568 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 APMAPQ9HDC9 416 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 FAM206AQ9NX38 181 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 KLRF1Q9NZS2 232 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF107Q9UII5 783 aaPredicted RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 NXT1Q9UKK6 140 aaKnown RBP8.23□□□□□ -1.09
DDB1-211ENST00000538280 MGAT4AQ9UM21 535 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 VDAC3Q9Y277 283 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 ZNF462Q96JM2 2506 aa8.23□□□□□ -1.09
DDB1-211ENST00000538280 OR2M5A3KFT3 312 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 MEN1O00255 615 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 KDM4BO94953 1096 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 GIPP09681 153 aaPredicted RBP8.22□□□□□ -1.09
DDB1-211ENST00000538280 PGA4P0DJD7 388 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 PGA3P0DJD8 388 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 RAB6AP20340 208 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 DNASE1P24855 282 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 FKBP2P26885 142 aaKnown RBP8.22□□□□□ -1.09
DDB1-211ENST00000538280 HTR2CP28335 458 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 LAP3P28838 519 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 EIF2S3P41091 472 aaKnown RBP8.22□□□□□ -1.09
DDB1-211ENST00000538280 RAD52P43351 418 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SELENOPP49908 381 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 BIDP55957 195 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 PER3P56645 1201 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SNRPD2P62316 118 aaKnown RBP8.22□□□□□ -1.09
DDB1-211ENST00000538280 C19orf57Q0VDD7 668 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 MYBPHQ13203 477 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SNTA1Q13424 505 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 TRA2AQ13595 282 aaKnown RBP eCLIP8.22□□□□□ -1.09
DDB1-211ENST00000538280 IL11RAQ14626 422 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 ODF4Q2M2E3 257 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 THEM4Q5T1C6 240 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 C3orf33Q6P1S2 294 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 ZNF529Q6P280 563 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 FAM198BQ6UWH4 519 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 ADGRE4PQ86SQ3 457 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 CDH26Q8IXH8 852 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 ELMOD2Q8IZ81 293 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 NKAIN3Q8N8D7 197 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 TMEM229BQ8NBD8 167 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 CLEC1AQ8NC01 280 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 NOXO1Q8NFA2 376 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 OR4C16Q8NGL9 310 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 OR6N1Q8NGY5 312 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SLC25A43Q8WUT9 341 aaPredicted RBP8.22□□□□□ -1.09
DDB1-211ENST00000538280 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 SNAPC3Q92966 411 aa8.22□□□□□ -1.09
DDB1-211ENST00000538280 FOXRED1Q96CU9 486 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms