RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ZNF787Q6DD87 383 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 VN1R4Q7Z5H5 301 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 SLC25A42Q86VD7 318 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 ZNF584Q8IVC4 421 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 GALNT16Q8N428 558 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 BPIFB2Q8N4F0 458 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 ZNF614Q8N883 585 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 C15orf54Q8N8G6 183 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 SLC30A7Q8NEW0 376 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 OR51D1Q8NGF3 324 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 OR2G2Q8NGZ5 317 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 OR8S1Q8NH09 359 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 OR6S1Q8NH40 331 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 HOXB13Q92826 284 aaPredicted RBP7□□□□□ -1.29
CPSF7-216ENST00000536548 MCHR2Q969V1 340 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 TMEM106AQ96A25 262 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 PTX4Q96A99 478 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 FOXRED1Q96CU9 486 aaPredicted RBP7□□□□□ -1.29
CPSF7-216ENST00000536548 TM4SF19Q96DZ7 209 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 PIK3IP1Q96FE7 263 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 Q96M85 177 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 ZNF75AQ96N20 296 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 PTCHD1Q96NR3 888 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 ZNF251Q9BRH9 671 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 LMF2Q9BU23 707 aaKnown RBP7□□□□□ -1.29
CPSF7-216ENST00000536548 G6PC3Q9BUM1 346 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 ESRP2Q9H6T0 727 aaKnown RBP7□□□□□ -1.29
CPSF7-216ENST00000536548 SMCO4Q9NRQ5 59 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 TMEM100Q9NV29 134 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 DEC1Q9P2X7 70 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 POMT1Q9Y6A1 747 aa7□□□□□ -1.29
CPSF7-216ENST00000536548 TRAV8-7A0A075B6U6 113 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 TEX13DA0A0J9YY54 714 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 IGLON5A6NGN9 336 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 IDSB3KWA1 339 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 YKT6O15498 198 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ZNF208O43345 1280 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 FADS1O60427 444 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 DXOO77932 396 aaKnown RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 NGFRP08138 427 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 FSTP19883 344 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RAB6AP20340 208 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ZBTB25P24278 435 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 COL8A1P27658 744 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 PEBP1P30086 187 aaKnown RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SDHAP31040 664 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 CX3CR1P49238 355 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ARRB1P49407 418 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 EMDP50402 254 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ADAM8P78325 824 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 PDZK1IP1Q13113 114 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SRSF6Q13247 344 aaKnown RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RUNX2Q13950 521 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SERTAD2Q14140 314 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ELOCQ15369 112 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 TCEA2Q15560 299 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 PRICKLE4Q2TBC4 344 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ELOA3BQ3SY89 546 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 CDNFQ49AH0 187 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RNASE10Q5GAN6 216 aaKnown RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 KIRREL2Q6UWL6 708 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 TAF8Q7Z7C8 310 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ADGRE4PQ86SQ3 457 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR4N5Q8IXE1 308 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 BAP18Q8IXM2 172 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RCBTB1Q8NDN9 531 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ELOA3Q8NG57 546 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR4E2Q8NGC2 313 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR4K17Q8NGC6 315 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR5AP2Q8NGF4 316 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR1J2Q8NGS2 313 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ZCCHC10Q8TBK6 192 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SAP25Q8TEE9 199 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 PAQR8Q8TEZ7 354 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 MITD1Q8WV92 249 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 PPP1R1CQ8WVI7 109 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 LIPHQ8WWY8 451 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 LCN9Q8WX39 176 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RSC1A1Q92681 617 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RNF166Q96A37 237 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RASD2Q96D21 266 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SEH1LQ96EE3 360 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SLC41A2Q96JW4 573 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 C4orf45Q96LM5 186 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 INTS14Q96SY0 518 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 CHST6Q9GZX3 395 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SEMA6CQ9H3T2 930 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 RNF122Q9H9V4 155 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 FBXO34Q9NWN3 711 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 SPHK1Q9NYA1 384 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 DHDHQ9UQ10 334 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 KCNK6Q9Y257 313 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 HIF3AQ9Y2N7 669 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 NOSIPQ9Y314 301 aaKnown RBP6.99□□□□□ -1.29
CPSF7-216ENST00000536548 ADAM18Q9Y3Q7 739 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 OR1A2Q9Y585 309 aa6.99□□□□□ -1.29
CPSF7-216ENST00000536548 F8P00451 2351 aa6.98□□□□□ -1.29
CPSF7-216ENST00000536548 KIF26BQ2KJY2 2108 aa6.98□□□□□ -1.29
CPSF7-216ENST00000536548 TRBV6-7A0A0A0MS04 114 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms