RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	NGB	Q9NPG2	151 aa		12.37	□□□□□ -0.43
POLE-208	ENST00000535934	MCUB	Q9NWR8	336 aa		12.37	□□□□□ -0.43
POLE-208	ENST00000535934	ASB6	Q9NWX5	421 aa		12.37	□□□□□ -0.43
POLE-208	ENST00000535934	RPL36	Q9Y3U8	105 aa	Known RBP	12.37	□□□□□ -0.43
POLE-208	ENST00000535934	SLC25A15	Q9Y619	301 aa		12.37	□□□□□ -0.43
POLE-208	ENST00000535934	ATR	Q13535	2644 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934		A8MVM7	634 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	SMAD7	O15105	426 aa	Known RBP	12.36	□□□□□ -0.43
POLE-208	ENST00000535934	LY6G6D	O95868	133 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	HMGN1	P05114	100 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	PTN	P21246	168 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	STOM	P27105	288 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	CRYBB2	P43320	205 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	ATP5J2	P56134	94 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	EGR4	Q05215	589 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	LTB	Q06643	244 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	GABRA6	Q16445	453 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	MICA	Q29983	383 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	CASP12	Q6UXS9	341 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	WDR31	Q8NA23	367 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	NFKBID	Q8NI38	313 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	UFD1	Q92890	307 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	RBPMS	Q93062	196 aa	Known RBP	12.36	□□□□□ -0.43
POLE-208	ENST00000535934	UBE2F	Q969M7	185 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	FBXW5	Q969U6	566 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	MUCL1	Q96DR8	90 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	C7orf34	Q96L11	122 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	SOST	Q9BQB4	213 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	WFDC6	Q9BQY6	131 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	NAA11	Q9BSU3	229 aa	Predicted RBP	12.36	□□□□□ -0.43
POLE-208	ENST00000535934	C1QTNF6	Q9BXI9	259 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	PPIL3	Q9H2H8	161 aa	Known RBP	12.36	□□□□□ -0.43
POLE-208	ENST00000535934	HEATR1	Q9H583	2144 aa	Known RBP	12.36	□□□□□ -0.43
POLE-208	ENST00000535934	TMCC3	Q9ULS5	477 aa		12.36	□□□□□ -0.43
POLE-208	ENST00000535934	CIB4	A0PJX0	185 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	AQP7P3	A6NL99	342 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	TMEM229A	B2RXF0	380 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ABCD4	O14678	606 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	TSPAN4	O14817	238 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	IFNA14	P01570	189 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	FAM157B	P0CG42	384 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ARAF	P10398	606 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	RAB3A	P20336	220 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ZNF83	P51522	516 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	LGALS3BP	Q08380	585 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	SPOCK1	Q08629	439 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ZMAT1	Q5H9K5	638 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	C1orf140	Q5VVS0	124 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PRAMEF8	Q5VWM4	474 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PRAMEF7	Q5VXH5	474 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	CLEC9A	Q6UXN8	241 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PTCHD4	Q6ZW05	846 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	RRM2B	Q7LG56	351 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934		Q8N402	240 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	OR9K2	Q8NGE7	335 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	OR2M2	Q96R28	347 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	FEV	Q99581	238 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	KCNJ15	Q99712	375 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	TMEM43	Q9BTV4	400 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PTDSS2	Q9BVG9	487 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	IFT22	Q9H7X7	185 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	TAS2R16	Q9NYV7	291 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	COPZ2	Q9P299	210 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	LSM2	Q9Y333	95 aa	Known RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PRKY	O43930	277 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	NDUFS7	O75251	213 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	HTR2A	P28223	471 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PCGF2	P35227	344 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	CDKN1A	P38936	164 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	RAG2	P55895	527 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	SNRPD2	P62316	118 aa	Known RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	RPS4X	P62701	263 aa	Known RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	KLHL22	Q53GT1	634 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	LINC00518	Q8N0U6	118 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	KDM8	Q8N371	416 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	BBS10	Q8TAM1	723 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ACOT12	Q8WYK0	555 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PTP4A1	Q93096	173 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	KTI12	Q96EK9	354 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	OR5M11	Q96RB7	305 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PRRG3	Q9BZD7	231 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	MIXL1	Q9H2W2	232 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	PARPBP	Q9NWS1	579 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	CISD1	Q9NZ45	108 aa	Known RBP	12.35	□□□□□ -0.43
POLE-208	ENST00000535934	MGAT4A	Q9UM21	535 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	SLC9A8	Q9Y2E8	581 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	CDH10	Q9Y6N8	788 aa		12.35	□□□□□ -0.43
POLE-208	ENST00000535934	LINC00854	A0A1B0GVQ3	168 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	C7orf66	A4D0T2	115 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	ZAR1L	A6NP61	321 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	FTCDNL1	E5RQL4	147 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	TPST2	O60704	377 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	CDRT1	O95170	752 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	CPE	P16870	476 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	CDK6	Q00534	326 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	FLI1	Q01543	452 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-208	ENST00000535934	LAPTM4A	Q15012	233 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	ZSWIM7	Q19AV6	140 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms