RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PRMT8Q9NR22 394 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-205ENST00000533464 PPT1P50897 306 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 CLINT1Q14677 625 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 OR1L3Q8NH93 324 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 BIN3Q9NQY0 253 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 DNAJB12Q9NXW2 375 aaKnown RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 A0A0A6YYJ9 748 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 LIMS3P0CW19 117 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 LIMS4P0CW20 117 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 GLI4P10075 376 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 FOLR1P15328 257 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 RAD52P43351 418 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 SUMO3P55854 103 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 SHEQ5VZ18 495 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 C8orf82Q6P1X6 216 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 SUMF1Q8NBK3 374 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 DMBX1Q8NFW5 382 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 OR51F2Q8NH61 342 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 GDF2Q9UK05 429 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 HDGFL3Q9Y3E1 203 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 TRBV5-3A0A0A0MS03 114 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 CHATP28329 748 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 PAN3Q58A45 887 aaKnown RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 SVBPQ8N300 66 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 IGHV1OR21-1A0A087WYE8 117 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 PTGER4P35408 488 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 LGI3Q8N145 548 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 EMG1Q92979 244 aaKnown RBP15.88■□□□□ 0.13
PHRF1-205ENST00000533464 TAAR8Q969N4 342 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 RAB39BQ96DA2 213 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 KIRREL1Q96J84 757 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 C1QTNF6Q9BXI9 259 aa15.88■□□□□ 0.13
PHRF1-205ENST00000533464 FAM186AA6NE01 2351 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 NINQ8N4C6 2090 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 A0A096LPE4 126 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 TRAV1-2A0A0B4J238 106 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 A0A0U1RQK1 487 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 A0A1W2PPZ6 126 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 EFSO43281 561 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 MOSPD3O75425 235 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 CD3DP04234 171 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 UBE2MP61081 183 aaKnown RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ZNF117Q03924 483 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 RNLSQ5VYX0 342 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 GLCCI1Q86VQ1 547 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 CCDC71Q8IV32 467 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 OR5AS1Q8N127 324 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 C10orf111Q8N326 155 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 OR51A2Q8NGJ7 313 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 OR11L1Q8NGX0 322 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 RBMXL1Q96E39 390 aaKnown RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 PTDSS2Q9BVG9 487 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 RBM38Q9H0Z9 239 aaKnown RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ERVMER34-1Q9H9K5 563 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ANKUB1A6NFN9 424 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 SHISA8B8ZZ34 492 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 DHHO43323 396 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 CT62P0C5K7 136 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 RPA2P15927 270 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ECI1P42126 302 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 MRPL41Q8IXM3 137 aaKnown RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 HSD17B11Q8NBQ5 300 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 FAM213BQ8TBF2 198 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 PFDN5Q99471 154 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 TAS2R5Q9NYW4 299 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 GIPP09681 153 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 DCTDP32321 178 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 CLDN15P56746 228 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 SHBQ15464 509 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 PDLIM3Q53GG5 364 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 GUSBP11Q6P575 273 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 RNF141Q8WVD5 230 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ARRDC1-AS1Q9H2J1 176 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 B3GAT1Q9P2W7 334 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 KLF13Q9Y2Y9 288 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ANKRD31Q8N7Z5 1873 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 WISP3O95389 354 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 FGF9P31371 208 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 SLC10A1Q14973 349 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 DMRTC1Q5HYR2 192 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ZADH2Q8N4Q0 377 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 OR52H1Q8NGJ2 320 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 ANKRD9Q96BM1 317 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-205ENST00000533464 LRRC3BQ96PB8 259 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 NGBQ9NPG2 151 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 KLK11Q9UBX7 282 aa15.87■□□□□ 0.13
PHRF1-205ENST00000533464 SDCBPO00560 298 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-205ENST00000533464 IMPA2O14732 288 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 LILRB5O75023 590 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 LALBAP00709 142 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 CLN3Q13286 438 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 HNF4GQ14541 408 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.86■□□□□ 0.13
PHRF1-205ENST00000533464 TMEM217Q8N7C4 229 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 IGHV1OR15-9A0A0B4J2B8 117 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 KRBOX1C9JBD0 128 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 TNFSF11O14788 317 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 CLDN20P56880 219 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 DUSP2Q05923 314 aa15.86■□□□□ 0.13
PHRF1-205ENST00000533464 SSX1Q16384 188 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms