RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RPL4P36578 427 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 AQP2P41181 271 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 RPS27P42677 84 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 CDKN2AP42771 156 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 STARP49675 285 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 GDI2P50395 445 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 CLDN20P56880 219 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 NANOS3P60323 173 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 RPS4XP62701 263 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TNK1Q13470 666 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 CDK5R1Q15078 307 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 LINC01590Q5TEZ4 76 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF57Q68EA5 555 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 MZT2AQ6P582 158 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 LRRC28Q86X40 367 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 SLC35F2Q8IXU6 374 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 WDSUB1Q8N9V3 476 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF511Q8NB15 262 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 OR6K6Q8NGW6 343 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 RGP1Q92546 391 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 GCDHQ92947 438 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 OMA1Q96E52 524 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 DERL3Q96Q80 235 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 MARVELD1Q9BSK0 173 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 NMNAT2Q9BZQ4 307 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 NXF5Q9H1B4 397 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 MOV10Q9HCE1 1003 aaKnown RBP7.26□□□□□ -1.25
NEDD8-207ENST00000533242 NRIP3Q9NQ35 241 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TAS2R10Q9NYW0 307 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 KLRF1Q9NZS2 232 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 KLHDC2Q9Y2U9 406 aa7.26□□□□□ -1.25
NEDD8-207ENST00000533242 TEX13CA0A0J9YWL9 993 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CENPXA8MT69 81 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 BLOC1S5-TXNDC5H3BN57 136 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 H7C1C5 153 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 OGG1O15527 345 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 F13BP05160 661 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CD3GP09693 182 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 NPR2P20594 1047 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CFL1P23528 166 aaKnown RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 EVI2BP34910 448 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 LCN6P62502 163 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 EFR3AQ14156 821 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 SLC36A2Q495M3 483 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CDONQ4KMG0 1287 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 C6orf183Q5T699 404 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 VWA1Q6PCB0 445 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF550Q7Z398 422 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 IZUMO1Q8IYV9 350 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 YIPF7Q8N8F6 280 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CNEP1R1Q8N9A8 125 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 SMIM19Q96E16 107 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 ZNF845Q96IR2 970 aaPredicted RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 SFXN2Q96NB2 322 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 SNX18Q96RF0 628 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 CNN2Q99439 309 aaKnown RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 THAP7Q9BT49 309 aaPredicted RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 HDHD2Q9H0R4 259 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 OPN3Q9H1Y3 402 aaPredicted RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 FKRPQ9H9S5 495 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 MCUBQ9NWR8 336 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 RPS6KB2Q9UBS0 482 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 GNG8Q9UK08 70 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 AK6Q9Y3D8 172 aaKnown RBP7.25□□□□□ -1.25
NEDD8-207ENST00000533242 WIF1Q9Y5W5 379 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 MED12Q93074 2177 aa7.25□□□□□ -1.25
NEDD8-207ENST00000533242 C2orf72A6NCS6 295 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ANKRD61A6NGH8 418 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ACOD1A6NK06 481 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 SLC22A20A6NK97 555 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 FZD7O75084 574 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 OR7A10O76100 309 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 GPANK1O95872 356 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 CGAP01215 116 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 TRAPPC2P0DI81 140 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 TRAPPC2BP0DI82 140 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ARSBP15848 533 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PPP3CBP16298 524 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 RAB3BP20337 219 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 SLC6A1P30531 599 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 KIR2DL2P43627 348 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 DIO1P49895 249 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 CCR4P51679 360 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ATP5J2P56134 94 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 SIRPAP78324 504 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 MRPS15P82914 257 aaKnown RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 DGCR2P98153 550 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 SKP2Q13309 424 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 GGTLC2Q14390 218 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 CDK10Q15131 360 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PLA1AQ53H76 456 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 BEX5Q5H9J7 111 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 CHMP1BQ7LBR1 199 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PRSS45Q7RTY3 260 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 FAM122BQ7Z309 247 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ATG4DQ86TL0 474 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-207ENST00000533242 NOXA1Q86UR1 476 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 PLCZ1Q86YW0 608 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 FAM71CQ8NEG0 241 aa7.24□□□□□ -1.25
NEDD8-207ENST00000533242 ACOT12Q8WYK0 555 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms