RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	MRPS22	P82650	360 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	IRF8	Q02556	426 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	TSN	Q15631	228 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	TRMT12	Q53H54	448 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF311	Q5JNZ3	666 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ANKRD22	Q5VYY1	191 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	FAM45BP	Q6NSW5	357 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NIPAL3	Q6P499	406 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NPSR1	Q6W5P4	371 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PEX26	Q7Z412	305 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PATL1	Q86TB9	770 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	VSTM4	Q8IW00	320 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF786	Q8N393	782 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	RNF175	Q8N4F7	328 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	FAM45A	Q8TCE6	357 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PNPT1	Q8TCS8	783 aa	Known RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	OSTF1	Q92882	214 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	LRRC58	Q96CX6	371 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	GRAMD2B	Q96HH9	432 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	VSTM2L	Q96N03	204 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF681	Q96N22	645 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	BTBD10	Q9BSF8	475 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	NPFFR1	Q9GZQ6	430 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	RACGAP1	Q9H0H5	632 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867		Q9N2K0	584 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	MALT1	Q9UDY8	824 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	FOXJ3	Q9UPW0	622 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	MMP24	Q9Y5R2	645 aa		4.81	□□□□□ -1.64
PUM1-222	ENST00000531867	BIRC6	Q9NR09	4857 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	TNFSF11	O14788	317 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SLC22A2	O15244	555 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	RGS14	O43566	566 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SHOX2	O60902	331 aa	Predicted RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	MSMB	P08118	114 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	NUDT17	P0C025	328 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PNMT	P11086	282 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	CSNK2A2	P19784	350 aa	Predicted RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	EDNRA	P25101	427 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SSTR1	P30872	391 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PTGFR	P43088	359 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PPT1	P50897	306 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF83	P51522	516 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	RAP1GDS1	P52306	607 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	GPX6	P59796	221 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	TPM4	P67936	248 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	TRIP10	Q15642	601 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	EFNB3	Q15768	340 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	AGK	Q53H12	422 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SYT14P1	Q58G82	188 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ENTPD8	Q5MY95	495 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ELFN2	Q5R3F8	820 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PDSS1	Q5T2R2	415 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	CPTP	Q5TA50	214 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PRAMEF5	Q5TYX0	476 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	PRAMEF6	Q5VXH4	476 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	HBM	Q6B0K9	141 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SLC48A1	Q6P1K1	146 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	CBLN3	Q6UW01	205 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	C9orf47	Q6ZRZ4	202 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SLC43A2	Q8N370	569 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	C1orf52	Q8N6N3	182 aa	Known RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	BPIFC	Q8NFQ6	507 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	OR5M8	Q8NGP6	311 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF675	Q8TD23	568 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	EMG1	Q92979	244 aa	Known RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	CPNE4	Q96A23	557 aa	Predicted RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	EFHD2	Q96C19	240 aa	Predicted RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	THOC1	Q96FV9	657 aa	Known RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	ANKRD27	Q96NW4	1050 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	RAB40C	Q96S21	281 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	MTERF1	Q99551	399 aa	Known RBP	4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SLC6A7	Q99884	636 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	CENPK	Q9BS16	269 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	TMEM43	Q9BTV4	400 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	SRXN1	Q9BYN0	137 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	MARCH7	Q9H992	704 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	FKRP	Q9H9S5	495 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	NTN4	Q9HB63	628 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	NEK6	Q9HC98	313 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	FLRT3	Q9NZU0	649 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	GMEB1	Q9Y692	573 aa		4.8	□□□□□ -1.64
PUM1-222	ENST00000531867	LOC105371242	A0A075B767	164 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	ZNF724	A8MTY0	619 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	FAM90A26	D6RGX4	464 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	PPIAL4D	F5H284	164 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	FOXE1	O00358	373 aa	Predicted RBP	4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	EFNA2	O43921	213 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	UGDH	O60701	494 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	BCAS1	O75363	584 aa	Predicted RBP	4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	PDE5A	O76074	875 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	SEMA3D	O95025	777 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	MBD3	O95983	291 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	TPM3	P06753	285 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	IGFBP1	P08833	259 aa	Predicted RBP	4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	DAO	P14920	347 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	PRTN3	P24158	256 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	SHC1	P29353	583 aa		4.79	□□□□□ -1.64
PUM1-222	ENST00000531867	IL12B	P29460	328 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms