RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NPFFO15130 113 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 MLNRO43193 412 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 RNF13O43567 381 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 OR10H3O60404 316 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 TRIM13O60858 407 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 FCN3O75636 299 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 OR6A2O95222 327 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 MT-ATP6P00846 226 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 PF4V1P10720 104 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ETFAP13804 333 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ECHS1P30084 290 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 SAA4P35542 130 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 PMELP40967 661 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 DSTNP60981 165 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 NCALDP61601 193 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 HOXA4Q00056 320 aaPredicted RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 GUCY1A3Q02108 690 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 PRB3Q04118 309 aaPredicted RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 KLRD1Q13241 179 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 WHAMMP3Q1A5X7 153 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 CDONQ4KMG0 1287 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ULK3Q6PHR2 472 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ARL9Q6T311 187 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 METAP1DQ6UB28 335 aaPredicted RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 NUDCD3Q8IVD9 361 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 C17orf53Q8N3J3 647 aaPredicted RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 NPRL2Q8WTW4 380 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 SLC38A5Q8WUX1 472 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 DPF1Q92782 380 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 CMBLQ96DG6 245 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 PANX1Q96RD7 426 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 SEPHS2Q99611 448 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 TMEM43Q9BTV4 400 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 NPFFR1Q9GZQ6 430 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 TSPYL1Q9H0U9 437 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ZNF702PQ9H963 129 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 SERTAD4Q9NUC0 356 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 ERVK-18Q9QC07 812 aa6.7□□□□□ -1.34
CD44-232ENST00000531118 NDRG4Q9ULP0 352 aaKnown RBP6.7□□□□□ -1.34
CD44-232ENST00000531118 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 IGKV1D-43A0A0B4J1Z2 117 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 A0A0G2JPF8 293 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 CENPBD1B2RD01 187 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 HNRNPCL2B2RXH8 293 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 HNRNPCL3B7ZW38 293 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MCIDASD6RGH6 385 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 F5H5P2 479 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 SHOXO15266 292 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 ADAM20O43506 726 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 CHST1O43916 411 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 HNRNPCL1O60812 293 aaKnown RBP6.69□□□□□ -1.34
CD44-232ENST00000531118 FAM20BO75063 409 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 KRT75O95678 551 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 HNRNPCL4P0DMR1 293 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 IRF2P14316 349 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 LMO1P25800 156 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 S100A3P33764 101 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 FMODQ06828 376 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 HABP2Q14520 560 aaPredicted RBP6.69□□□□□ -1.34
CD44-232ENST00000531118 CLEC12AQ5QGZ9 265 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 CRIP3Q6Q6R5 217 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 BTN2A1Q7KYR7 527 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 ZNF572Q7Z3I7 529 aaPredicted RBP6.69□□□□□ -1.34
CD44-232ENST00000531118 PNKDQ8N490 385 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 Q8NFD4 153 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 Q8TCH9 128 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 SLC7A13Q8TCU3 470 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MAP6Q96JE9 813 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MRPL13Q9BYD1 178 aaKnown RBP6.69□□□□□ -1.34
CD44-232ENST00000531118 NUF2Q9BZD4 464 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 PCDHAC1Q9H158 963 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MEAF6Q9HAF1 191 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 RAB18Q9NP72 206 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 SLCO1B3Q9NPD5 702 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 C20orf141Q9NUB4 165 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
CD44-232ENST00000531118 TAS2R5Q9NYW4 299 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 SELENONQ9NZV5 590 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 ONECUT1Q9UBC0 465 aa6.69□□□□□ -1.34
CD44-232ENST00000531118 MEIOCA2RUB1 952 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 COPEO14579 308 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 DOK2O60496 412 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 TRMUO75648 421 aaKnown RBP6.68□□□□□ -1.34
CD44-232ENST00000531118 CST2P09228 141 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 TUBG1P23258 451 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 EEF1B2P24534 225 aaKnown RBP6.68□□□□□ -1.34
CD44-232ENST00000531118 PRKAR1BP31321 381 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 HTR5AP47898 357 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 CCT5P48643 541 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 RAD23AP54725 363 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 DLX1P56177 255 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 OR1Q1Q15612 314 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 SGCAQ16586 387 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 ZNF74Q16587 644 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 PRAMEF6Q5VXH4 476 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 ZNF621Q6ZSS3 439 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 HDDC2Q7Z4H3 204 aa6.68□□□□□ -1.34
CD44-232ENST00000531118 NANOGNBQ7Z5D8 188 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms