RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 NVLO15381 856 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 DEDDO75618 318 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 SURF6O75683 361 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 SLC22A5O76082 557 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 GLSO94925 669 aaPredicted RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 CYB5R3P00387 301 aaPredicted RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 IGLV6-57P01721 117 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 IGHV3-11P01762 117 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 EIF4EP06730 217 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 SYKP43405 635 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 RPL23P62829 140 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 BST2Q10589 180 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 CHIT1Q13231 466 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 SOHLH1Q5JUK2 328 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 LINC00336Q6ZUF6 198 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 BHLHE23Q8NDY6 225 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 B3GNT7Q8NFL0 401 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 OR5T1Q8NG75 326 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 OR2A1Q8NGT9 310 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 OR5B3Q8NH48 314 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 SLC7A13Q8TCU3 470 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 LRRC29Q8WV35 223 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 HGDQ93099 445 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 TUBGCP3Q96CW5 907 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 DNAJC1Q96KC8 554 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 ZNF317Q96PQ6 595 aaPredicted RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 ATP5SQ99766 215 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 TMEM9BQ9NQ34 198 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 TRMT112Q9UI30 125 aaKnown RBP1.07□□□□□ -2.24
NUP98-218ENST00000530516 IKZF2Q9UKS7 526 aa1.07□□□□□ -2.24
NUP98-218ENST00000530516 IGHV3-49A0A0A0MS15 119 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 IGHV1-3A0A0C4DH29 117 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 OR5H1A6NKK0 313 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 LRRIQ3A6PVS8 624 aaPredicted RBP1.06□□□□□ -2.24
NUP98-218ENST00000530516 GABRR3A8MPY1 467 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 H7C417 338 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 NDC80O14777 642 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 RDH16O75452 317 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 SEMA3DO95025 777 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 NDUFB10O96000 172 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 SERPINA5P05154 406 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 CD37P11049 281 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 ERGP11308 486 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 ATF6P18850 670 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 GGT1P19440 569 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 PSMD8P48556 350 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 MEF2CQ06413 473 aaPredicted RBP1.06□□□□□ -2.24
NUP98-218ENST00000530516 QPRTQ15274 297 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 GPR107Q5VW38 600 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 ADNP2Q6IQ32 1131 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 NKAIN4Q8IVV8 208 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 PRELID2Q8N945 189 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 OR5B12Q96R08 314 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 SLC39A3Q9BRY0 314 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 LINC00574Q9H8X3 128 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 NEK6Q9HC98 313 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 MTFP1Q9UDX5 166 aa1.06□□□□□ -2.24
NUP98-218ENST00000530516 ARPC4-TTLL3A0A0A6YYG9 625 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 CEACAM18A8MTB9 384 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 NDUFC2-KCTD14E9PQ53 114 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 K7EMT4 169 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 KLHL41O60662 606 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 CNMDO75829 334 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 CST1P01037 141 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 HRES1P13985 223 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 NTF3P20783 257 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 PSMB5P28074 263 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 GBX2P52951 348 aaPredicted RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 VSX2P58304 361 aaPredicted RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 TNFRSF9Q07011 255 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 SIGLEC14Q08ET2 396 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 RBMY1FQ15415 496 aaKnown RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 KRTAP13-4Q3LI77 160 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 SMARCD3Q6STE5 483 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 SASS6Q6UVJ0 657 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 ZCCHC7Q8N3Z6 543 aaKnown RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 ZNF645Q8N7E2 425 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 OR11H7Q8NGC8 314 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 GPR151Q8TDV0 419 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 DCPSQ96C86 337 aaKnown RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 MICU1Q9BPX6 476 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 CHCHD7Q9BUK0 85 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 SUN2Q9UH99 717 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 NUP50Q9UKX7 468 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 BLOC1S6Q9UL45 172 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 CSDC2Q9Y534 153 aaKnown RBP1.05□□□□□ -2.24
NUP98-218ENST00000530516 CACNA1DQ01668 2161 aa1.05□□□□□ -2.24
NUP98-218ENST00000530516 A0A0J9YXV3 536 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 BICDL2A1A5D9 508 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 ARHGEF35A5YM69 484 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 NCBP2LA6PVI3 153 aaKnown RBP1.04□□□□□ -2.24
NUP98-218ENST00000530516 RAB29O14966 203 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 ACSM4P0C7M7 580 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 MX1P20591 662 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 CHMLP26374 656 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 IDH2P48735 452 aaKnown RBP1.04□□□□□ -2.24
NUP98-218ENST00000530516 TMED10P49755 219 aaKnown RBP1.04□□□□□ -2.24
NUP98-218ENST00000530516 HNMTP50135 292 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 ARFIP1P53367 373 aa1.04□□□□□ -2.24
NUP98-218ENST00000530516 CMC4P56277 68 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms