RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 SRRM5B3KS81 715 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 H0YL77 283 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 XKRYO14609 159 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 FFAR1O14842 300 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
CAPN1-219ENST00000530495 CTLA4P16410 223 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ZNF26P17031 533 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-219ENST00000530495 RPL4P36578 427 aaKnown RBP12.46□□□□□ -0.41
CAPN1-219ENST00000530495 YAP1P46937 504 aaKnown RBP12.46□□□□□ -0.41
CAPN1-219ENST00000530495 BPIFB3P59826 476 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 DEFB112Q30KQ8 113 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ZNF404Q494X3 552 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ZBED5Q49AG3 693 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 TTMPQ5BVD1 217 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 MESTQ5EB52 335 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 OR2T2Q6IF00 324 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-219ENST00000530495 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 SLC30A2Q9BRI3 323 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ASH2LQ9UBL3 628 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.41
CAPN1-219ENST00000530495 A0A087WUU8 490 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 A0A1B0GWJ7 208 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 FAM181BA6NEQ2 426 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 LRRC30A6NM36 301 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 FAM220BPB1ANY3 271 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 CDC42EP2O14613 210 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 MRASO14807 208 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 KNG1P01042 644 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 DBHP09172 617 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 PMELP40967 661 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 SRSF4Q08170 494 aaKnown RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 KCNMB1Q16558 191 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 Q6YL49 198 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 MBOAT2Q6ZWT7 520 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 NLRC3Q7RTR2 1065 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 C1orf87Q8N0U7 546 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 FITM2Q8N6M3 262 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 KIR3DL3Q8N743 410 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 OR2T12Q8NG77 320 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 OR8B3Q8NGG8 313 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 APOBEC3DQ96AK3 386 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 OR8B2Q96RD0 313 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 NUDT16L1Q9BRJ7 211 aaKnown RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 NMNAT1Q9HAN9 279 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 BEX1Q9HBH7 125 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 NOX4Q9NPH5 578 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 PTTG3PQ9NZH4 202 aa12.45□□□□□ -0.42
CAPN1-219ENST00000530495 PDP1Q9P0J1 537 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 COA3Q9Y2R0 106 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-219ENST00000530495 A0A0G2JK05 382 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 BBIP1A8MTZ0 92 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 IQCF6A8MYZ5 107 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 F5H5P2 479 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 J3KTA2 159 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 RER1O15258 196 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 MLNRO43193 412 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 SLC16A7O60669 478 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 KHDRBS3O75525 346 aaKnown RBP12.44□□□□□ -0.42
CAPN1-219ENST00000530495 IFNW1P05000 195 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 CRYBA1P05813 215 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 PITPNBP48739 271 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 HIST1H3AP68431 136 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 OTPQ5XKR4 325 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 ZNF730Q6ZMV8 503 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 ZNF841Q6ZN19 808 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 HIST2H3AQ71DI3 136 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 MOGAT3Q86VF5 341 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 ZNF570Q96NI8 536 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 TMEM100Q9NV29 134 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 MRGBPQ9NV56 204 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 CLN8Q9UBY8 286 aa12.44□□□□□ -0.42
CAPN1-219ENST00000530495 IGHV3-64DA0A0J9YX35 117 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 PHYHO14832 338 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 PTP4A3O75365 173 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 NDUFA7O95182 113 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 SDHAP31040 664 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 GATA4P43694 442 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 GPR4P46093 362 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 RAG2P55895 527 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 FGF12P61328 243 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 KLF10Q13118 480 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-219ENST00000530495 FAM201AQ5SY85 155 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-219ENST00000530495 FIP1L1Q6UN15 594 aaKnown RBP12.43□□□□□ -0.42
CAPN1-219ENST00000530495 LYPD2Q6UXB3 125 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 C17orf107Q6ZR85 190 aa12.43□□□□□ -0.42
CAPN1-219ENST00000530495 DCDC5Q6ZRR9 648 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms