RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13	□□□□□ -0.33
NR1H3-231	ENST00000529540	LINC00114	Q6XXX2	140 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	CHMP1B	Q7LBR1	199 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13	□□□□□ -0.33
NR1H3-231	ENST00000529540	OR51A7	Q8NH64	312 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	OR14L1P	Q8NHC6	308 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	THEM6	Q8WUY1	208 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	PCNP	Q8WW12	178 aa	Known RBP	13	□□□□□ -0.33
NR1H3-231	ENST00000529540	FCAMR	Q8WWV6	532 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	PNPLA2	Q96AD5	504 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	ZMYND19	Q96E35	227 aa	Predicted RBP	13	□□□□□ -0.33
NR1H3-231	ENST00000529540	ELMOD3	Q96FG2	381 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	DERL3	Q96Q80	235 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	TNFRSF13C	Q96RJ3	184 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	NOX4	Q9NPH5	578 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	GLS2	Q9UI32	602 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	ETV7	Q9Y603	341 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	IGF2R	P11717	2491 aa		13	□□□□□ -0.33
NR1H3-231	ENST00000529540	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540		A0A1W2PPK0	400 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	C17orf51	A8MQB3	221 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	HMSD	A8MTL9	139 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	CREBL2	O60519	120 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	KHDRBS3	O75525	346 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	TRAPPC6A	O75865	159 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	NDUFB6	O95139	128 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	CRYAB	P02511	175 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SRM	P19623	302 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	MST1	P26927	711 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	PPIA	P62937	165 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	FOXF1	Q12946	379 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	TOMM34	Q15785	309 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	LINC00303	Q3SY05	128 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	RAET1L	Q5VY80	246 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	OR52E2	Q8NGJ4	325 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	STK35	Q8TDR2	534 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SNX33	Q8WV41	574 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	DDIT4L	Q96D03	193 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	KLHL15	Q96M94	604 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SEC22C	Q9BRL7	303 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	NOX3	Q9HBY0	568 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	ACKR4	Q9NPB9	350 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	TMED7	Q9Y3B3	224 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	CSAG2	Q9Y5P2	127 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	PINLYP	A6NC86	204 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540		A8MVM7	634 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	KRBOX1	C9JBD0	128 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SERPINI2	O75830	405 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	TOX	O94900	526 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	NDUFB2	O95178	105 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	HRG	P04196	525 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	GYPB	P06028	91 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	NFYA	P23511	347 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	PSMA6	P60900	246 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	DBP	Q10586	325 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SLC10A1	Q14973	349 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	MTFR2	Q6P444	385 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	TMEM251	Q8N6I4	163 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	MOSPD2	Q8NHP6	518 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SCARB1	Q8WTV0	552 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	HAVCR1	Q96D42	359 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	SHARPIN	Q9H0F6	387 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	CA10	Q9NS85	328 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	MRPL15	Q9P015	296 aa	Known RBP	12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	GNG8	Q9UK08	70 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	ZNF281	Q9Y2X9	895 aa		12.99	□□□□□ -0.33
NR1H3-231	ENST00000529540	FRY	Q5TBA9	3013 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	PTPRQ	Q9UMZ3	2332 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	ZFHX4	Q86UP3	3567 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540		A8MXK9	166 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	OR2T1	O43869	369 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	SUSD5	O60279	629 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	ZIC3	O60481	467 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	RGS11	O94810	467 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	HIST1H2AB	P04908	130 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	NMB	P08949	121 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	FAM87A	P0C7U9	286 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	NUP62	P37198	522 aa	Predicted RBP	12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	HCCS	P53701	268 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	HES5	Q5TA89	166 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	FCRLA	Q7L513	359 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	HIST3H2A	Q7L7L0	130 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	MEIOB	Q8N635	442 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	OR6S1	Q8NH40	331 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	HIST1H2AC	Q93077	130 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	S100A16	Q96FQ6	103 aa	Known RBP	12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	LINC00052	Q96N35	136 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	CHIA	Q9BZP6	476 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	NMNAT2	Q9BZQ4	307 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	ZDHHC11	Q9H8X9	412 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540		V9GY05	133 aa		12.98	□□□□□ -0.33
NR1H3-231	ENST00000529540	RFPL3S	P0C7P2	107 aa		12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	PPP3CB	P16298	524 aa		12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	HIST1H1C	P16403	213 aa	Known RBP	12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	MAGEA5	P43359	124 aa		12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	SCAND1	P57086	179 aa		12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	RAC1	P63000	192 aa		12.97	□□□□□ -0.33
NR1H3-231	ENST00000529540	HLX	Q14774	488 aa	Predicted RBP	12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms